Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00558 ATGTCTGGATGCAATAAATCACCTAAAAATGATCATCATTCAATTAAATATTGGCGGAGTCAACATGGGGGGGCTTCCTTTAAGGATGATCTTTCTTGTGTGGATTATTCGCCTTTTCTTTCCAATAATGAGAATAAGCAATGCTACAGAAGTTCTCAACAGAAGTTCCCTGAGATACTGAGCACTGCTCATCTCATCTCTGCAATAGGTCATATATGGGATTCTGCAAGCCACCCACTATCTTTTTTACTCCCGAAGGAAAATGCAAATCAAGATGATAAAGGATTTCCAAAAGAGAAAATTCTGGATAGCATTGATAGGAAAAGGAAAAACGTGGTTACTTCAAATAACTCTAATTGCTGTCCTGTTAATATGGAGCCTACTGGCTTCGGTTCACGGATTGTGCAGGAGAAATTGGATTTCCCTAAGGTAACACAGAAGATGTTAGTATTTGAATCTTCTAATGAAAGTCAAGATTATGTTTATTTTTTATTCCGGAGATTTTTGCTGGCCAGTCATAAAAATTCAAATGTATATGCGAAAGAAAGGGAACTTGGTAATGAGGAAATTTCATTTAGATCCAGAAATGTACATTGGCGGATGAGTAGGACTGCTCCTAAGAGGTTAAACTGTCAAGTGAAGGTTACTGAGCCTGAGAACCTGAAAATTAATTCCTTGGTTGCTAGGGACTGTATTTCAACAGATACAAGCACCCTTGCACTGGCTAATGAGAGTCATGTGTGCTGTCCTGATTTAATCATACATGAAGATCCACAATTATCTAATGATGCAACTCTGAATACAAAAAAAGTTAGCCCTCTGTGTTCTGACTATTTTCTTCAAGCTGTGTGTGATGCTAAGGCAGATGTTGGTGCTTGTCAGACCCTATCTTCTAGTATCCATGCAGACTATCACATTAACTCTTTAGATACTTGTAATAGTGCTTCTGAGCAGTGCCAACACCAGATTGATGATAATGAATTGCCGGAAATCCAAAGAAAACATTTCTCAGATATAACTGGTGATGAACCTAAGGTTCAGATCTTATCCGCAACCCATCAGAAGCCTTGTCATTCCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCATTGGCTGGAGTATGTGTCAGCCTTTGTCTGCATCCTGTTGATACAATTAAGACAGTCATTCAATCATGCCGTGCAGAACAGAGGTCCATCTTTTACATTGGCCAATCAATAGTTTCTGATAGAGGGTTGTCTGCACTATATCGTGGAATTGCTACAAACATTGCTTGTTCAGCTCCAATTTCTGCAGTTTATACTTTAACCTATGAATCAGTTAACGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTTACTCCTAGTGAGCGTATAAAGCAGCAGATGCAAGTTAGGTCTCATTATCGTAACTGCTGGGATGCATTGGTTGGGATTATCAGAAATGGTGGTTTTTCCTCCCTAGATGCAGGTTGGGGAGCTGTACTGTGCCGCAATGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTTTGCCATTTAGTATTCAGTCCGACACATTTCAGACTTTAGTGTCTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGGCTAGATTACAGACACAGGGGTTGACTCCACGGTTGATTATGTACATGTCTCAAGGATCACTGTTCTTTGCTTCGTATGAATTTTTCAAGAGGTTATTGTCTTTGGAAGCATCACTTCCCACTGGTTTATACATCCAGAACAATGACCAGAATGTTGAGGACAGAAAAAAATTAGAATTAACAAGTCCATCATCAGGAGTTCCACCAGCAGCATCCCCAAGTCTTGATAGTTTGCATTCTTGTTAA 1965 0.3975 MSGCNKSPKNDHHSIKYWRSQHGGASFKDDLSCVDYSPFLSNNENKQCYRSSQQKFPEILSTAHLISAIGHIWDSASHPLSFLLPKENANQDDKGFPKEKILDSIDRKRKNVVTSNNSNCCPVNMEPTGFGSRIVQEKLDFPKVTQKMLVFESSNESQDYVYFLFRRFLLASHKNSNVYAKERELGNEEISFRSRNVHWRMSRTAPKRLNCQVKVTEPENLKINSLVARDCISTDTSTLALANESHVCCPDLIIHEDPQLSNDATLNTKKVSPLCSDYFLQAVCDAKADVGACQTLSSSIHADYHINSLDTCNSASEQCQHQIDDNELPEIQRKHFSDITGDEPKVQILSATHQKPCHSLAKQEHAFSGALAGVCVSLCLHPVDTIKTVIQSCRAEQRSIFYIGQSIVSDRGLSALYRGIATNIACSAPISAVYTLTYESVNAALLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQVRSHYRNCWDALVGIIRNGGFSSLDAGWGAVLCRNVPHSIIKFYTYESLKQVMPSLPFSIQSDTFQTLVSGGLAGSTAALFTTPFDVIKARLQTQGLTPRLIMYMSQGSLFFASYEFFKRLLSLEASLPTGLYIQNNDQNVEDRKKLELTSPSSGVPPAASPSLDSLHSC* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00558 654 MobiDBLite consensus disorder prediction 638 654 - -
Rops2g00558 654 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 345 580 - -
Rops2g00558 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 360 444 IPR018108 -
Rops2g00558 654 SUPERFAMILY Mitochondrial carrier 364 602 IPR023395 -
Rops2g00558 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 453 536 IPR018108 -
Rops2g00558 654 Pfam Mitochondrial carrier protein 547 579 IPR018108 -
Rops2g00558 654 Pfam Mitochondrial carrier protein 364 445 IPR018108 -
Rops2g00558 654 Pfam Mitochondrial carrier protein 454 537 IPR018108 -
Rops2g00558 654 Gene3D Mitochondrial carrier domain 365 612 IPR023395 -
Rops2g00558 654 FunFam Mitochondrial substrate carrier protein-like 340 487 - -
Rops2g00558 654 MobiDBLite consensus disorder prediction 632 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00558 Rops-Chr2 8132251 8136601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00558 368 581 Chloroplast and Mitochondria Gene Families AT2G30160 32.589 4.79e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00558 - - gmx:100812271 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00558 2 8132251 8136601 Rops2g00558 2 8132251 8136601 ECH