Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00555 ATGAGAAACCATGTGACTACATCAATGGCAAATGGGTCCGCGACAGGAGAGGCCCTTTGTATAATGGTACAACCTGTGATACCATCAAACCAAACCATAATTGTATCATCAATGGCAGGCCTGACTCGGGCTATATTTATTGGAGATGCATACCAAAATGATTGTGTCCATTGGTGCTTGCCAGGGCCTATAGACACATGGAATAAGATTTTTCTTGAGCTTATGAAGAGGTGGAGGAGGAACAGTCATCGAGTAAAGAGTGAGGATTCCTTAAATGCAAAGCTTAATAGAACAGAAATTGAAAATTCCTGGTTCTTTTTTGGTGGCTCATATCTTGGAGCACTTGCAAGTGAGCCTGTTGTTGTTAAAAAGGGGCAACATATTGTTGAAGTCAAGCTGCAGGGTATTACTAAAGGGTTAGTTGCACAAGAAGTTCTGTCTACATTAACCAGGAATGGAAAATCACTAGATTTTGTACTATGCATTGGAGATGATAGATCTGATGAGGATATGTTTGGGAGCATATTAACCAAACCTTACAGTGCAACCTCCTCTTCAGCACTAGAAATTTTTGCATGCACTGTTGGACAAAAACCAAGCAAAGCTAGATACTACCTAGATGAATTGTGGATGTGA 636 0.4041 MRNHVTTSMANGSATGEALCIMVQPVIPSNQTIIVSSMAGLTRAIFIGDAYQNDCVHWCLPGPIDTWNKIFLELMKRWRRNSHRVKSEDSLNAKLNRTEIENSWFFFGGSYLGALASEPVVVKKGQHIVEVKLQGITKGLVAQEVLSTLTRNGKSLDFVLCIGDDRSDEDMFGSILTKPYSATSSSALEIFACTVGQKPSKARYYLDELWM* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00555 211 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 110 210 - -
Rops2g00555 211 Gene3D - 96 209 IPR023214 -
Rops2g00555 211 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 115 208 IPR001830 GO:0003824|GO:0005992
Rops2g00555 211 Pfam Trehalose-phosphatase 116 208 IPR003337 GO:0003824|GO:0005992
Rops2g00555 211 SUPERFAMILY HAD-like 110 208 IPR036412 -
Rops2g00555 211 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 50 73 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00555 Rops-Chr2 8039096 8040062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00555 114 208 Trehalose Biosynthesis Gene Families AT4G17770 60.000 5.18e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00555 K16055 - gmx:100812031 159.844