Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00553 ATGTCTGGATGCAATAAATCACCTAAAAATGATCATCATTCAATTAAATATTGGCGGATTCAACATGGGGGGACTTCCTTTAAGGATGATCTTTCTTGTGTGGATTATTCGCCTTCTTTTTCCAATAATGAGAATAAGCAATGCTACAGAAGTTCTCAACAGAAGTCCCCTGAGATACTGAGCACTGGTCAGCTCCTCTCTGCAATAGGTCATCTATGGGATTCTGCAAGTCGTCCACTTTATTTTTTACTCCCGAAGGAAAATGTGAATCAAGATGATAAAGGATTCACTAAAGAGAAAATTCTGAATAGCATTGATGGGAAAAGGAAAAATGTGGTTACTTCAAATAACTCTAATTGCTGTCCTGTTAATATGGAGCCTACTGGCTTCGGTTCACGGATTGTGCAGGAGAAATTGAATTTCCCTAAGGTAACACAGAAGATGTTAGTATTTGAATCTTCTAATGAAAGTCAAGATTATATTTATTTTTTATTCCGGAGATTTTTGCTGGCCAGTCATAAAAATTCAAATGTATATTCAAAAGAAATGGAACTTGGTAGTGAGGAAATTTCATTTAGATCGAGGATGAGTAGGACTGCTCCTAAGGGGCTACACTGTCAACCGATGGTTACTGAGCCTGAGAACCTGAAAATTAATTCCTTGGTTGCTGGGGGCTGTATTTCAACAGATACAAGCACCCCTGCATTGGCTAATAAGAGTCATGTGTGCAGTCCTGATTTAATCATACATGAAGATCCACAATTACCTAATGATGCGACTCTGAATACAAAAAAAGTTAGCCCTCTGTGTTCTGACTATTTTCTTCAAGCTGTGCCTGATACTAAGGCAGATGTTGGTGCTTGTCAGACTCTATCTTCTAGTGTCCATGCAGACTATCACATTAACTCTTTAGATACCTGTAATAGTGCTTCTGAGCAGTGTCAACACAAGATTGATGATAATGAATTGCTGGAAATCCAAAGAAAACATTTCTCGGATATAACTGGTGATGAACCTAAGGTTCAGATCTTATCCGCAACCCATCAGAAGCCTTGTCATTCCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCATTGGCTGGAGTATGTGTCAGCCTTTGTCTGCATCCTGTTGATACAATTAAGACAGTCACTCAATCATGCCATGCAGAACAGAAGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTGCCTGCACTATATCGTGGAATTGCTACAAACATTGCTTGTTCAGCTCCAATTTCTGCAGTTTATACTTTAACCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTCACTCCTAGTGAGCGTATAAAGCAGCAGATGCAAGTTAGGTCTCATTATCGCAACTGCTGGGATGCACTGGTCGGGATTATCAAAAACGGTGGTTTTTCCTCCCTATATGCAGGTTGGGGAGCTGTACTGTGCCGGAATGTTCCACATTCAATCATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTTTGCCATTTAATATTCAGTCCAACACGTTTCAGACTTTAGTGTCTGGAGGATTAGCTGGATCTACCGCTGCGTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGATCTATAAATCAATATGATAGTGTGCTCCATGCCCTTTACAAAATTAGCAAGAGTGAAGGTTTAAAGGGCCTATACAGGGGGTTGACTCCACGGTTGATTATGTACATGTCTCAAGGATCACTGTTCTTTGCTTCGTATGAATTTTTCAAGAGGTTATTTTCTCTGGAAGCATCACTTCCCACTGGTTTACACATCCAGAACGATGACCAGAATGTTGAGGACAAAATAGAATTAACAAGTCCATCATCAGGAGTTCCAGCTGCAGCATCCCCAAGTCTTGATAGTTTGCATTCTTGA 2028 0.3999 MSGCNKSPKNDHHSIKYWRIQHGGTSFKDDLSCVDYSPSFSNNENKQCYRSSQQKSPEILSTGQLLSAIGHLWDSASRPLYFLLPKENVNQDDKGFTKEKILNSIDGKRKNVVTSNNSNCCPVNMEPTGFGSRIVQEKLNFPKVTQKMLVFESSNESQDYIYFLFRRFLLASHKNSNVYSKEMELGSEEISFRSRMSRTAPKGLHCQPMVTEPENLKINSLVAGGCISTDTSTPALANKSHVCSPDLIIHEDPQLPNDATLNTKKVSPLCSDYFLQAVPDTKADVGACQTLSSSVHADYHINSLDTCNSASEQCQHKIDDNELLEIQRKHFSDITGDEPKVQILSATHQKPCHSLAKQEHAFSGALAGVCVSLCLHPVDTIKTVTQSCHAEQKSIFYIGKSIVSDRGLPALYRGIATNIACSAPISAVYTLTYESVKAALLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQVRSHYRNCWDALVGIIKNGGFSSLYAGWGAVLCRNVPHSIIKFYTYESLKQVMPSLPFNIQSNTFQTLVSGGLAGSTAALFTTPFDVIKTRLQTQIPGSINQYDSVLHALYKISKSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKRLFSLEASLPTGLHIQNDDQNVEDKIELTSPSSGVPAAASPSLDSLHS* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00553 675 MobiDBLite consensus disorder prediction 654 675 - -
Rops2g00553 675 MobiDBLite consensus disorder prediction 660 675 - -
Rops2g00553 675 FunFam Mitochondrial substrate carrier protein-like 482 643 - -
Rops2g00553 675 Pfam Mitochondrial carrier protein 542 631 IPR018108 -
Rops2g00553 675 Pfam Mitochondrial carrier protein 449 532 IPR018108 -
Rops2g00553 675 Pfam Mitochondrial carrier protein 359 440 IPR018108 -
Rops2g00553 675 ProSiteProfiles Solute carrier (Solcar) repeat profile. 448 531 IPR018108 -
Rops2g00553 675 ProSiteProfiles Solute carrier (Solcar) repeat profile. 541 629 IPR018108 -
Rops2g00553 675 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 337 633 - -
Rops2g00553 675 Gene3D Mitochondrial carrier domain 448 666 IPR023395 -
Rops2g00553 675 Gene3D Mitochondrial carrier domain 328 447 IPR023395 -
Rops2g00553 675 ProSiteProfiles Solute carrier (Solcar) repeat profile. 355 439 IPR018108 -
Rops2g00553 675 FunFam Mitochondrial substrate carrier protein-like 335 481 - -
Rops2g00553 675 SUPERFAMILY Mitochondrial carrier 359 626 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00553 Rops-Chr2 7985490 7990269 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00553 363 630 Chloroplast and Mitochondria Gene Families AT1G07030 32.130 1.17e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00553 - - gmx:100812271 943.725