Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00552 ATGCAGTGGGAACAGGAGGGAGGGGGAAAAGGGGGAACTGACAACTTAAATGGGTTTCCTCGAGGAGGTGTTAACCAAAGAGACACTTTAGGAGGCATAGTAGAAGGTAGCCAGCTTGCATCTCTGGTGAAGTGGATAAATGCTGTGCTTCCTAACTTTAATCTACCTTTAGAAACTTCAGAGGAAGAATTCAGATTATGGTTGAGGGATGGATCTATATTATGCAGCATTTTGGACAAGCTGGTTCCTGGTTCAATGGAGGGAAGCGGTTCTTTGAATGAGCCAGTCAGCGTTAAAAGGTTTCTGGTGGCTTTGAATGAATTGGGATTGTCGGGATTTGAGTTGTCAGACTTAGAGCAGGGATCCACGGTGCCTGTGTTGCAGTGCCTTGAGACTCTGAAAACTCATTTTGCTTATAACGCTGCACGAGAAAATATCCAAAGTTGTTCTAGAAAGAGGTGGGATCAGTCAAATCTAACATATCTAGAGGAAACTGATGGTTTCCTCAAGGATGCTTCAACATTCCAACATGCTATTGATAATTCTGTTGTATCAGGTGGAATTGCTTCCACAGATCCTATTGGATTGAAGTCTAATGAACTTTGCCAGTTGAAGCGAGGATCGCACATGGACCTTTCAGATGCTAAACTTAATGAATTATTAAAATCAAACAATTTGGACAGTGTCTCAACTCAATTTCTTTTTAACATAGGAAATAGGATCCTAAGTGATATCTTTGAAAGGAAGAATGAAGATGTACCTCAAGGTCAGCGTGCAGCATGCCTGTTGAGGAAAATTCTACAAGTAATTGAGTCGCGCTTTTCAAATCAAGCAGAAAGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTACCAAACAAGAATAAATGTGCTTGAAACCCTGGCGGTAGGGACAAACGAAGAGAATGAGGTTGTTGCAAGTTGGGTTCAGCAGTTGAAGCTTTCTTTGCAGCTTGAACAAACTAAGCTAGAGGAGAAGAAGAAACTTGAAGAGCAGGATTTTTCTCGATTAAAGAAAGACAAAGTTCGTAATGAAATCGAAATTTCTGCATTGAAGCAAGATTTGGAAATGGCCAAAAGAGCACATGAAGAGCATGTTTCGCAGTTAGAATTGCAAGCTACTGAATCTAAAGCTGAATATGAGAAAAGGATAGAGGAACTTAAGTGTCATCTTGCTGATGCAAAGAAGCAAGTGAAGGAACAGGAGACATTTTTGGAATCCAGATATTTGAATTGGAAGAATAAAGAGCATACCTACCAAAGTTTCGTAAATCACCAATTTAAAGCTTTCAAGGAATTGAGAGCTGCCATGAAGTCTGTCAAAAATGAAGTGACAAAAACAAAAAGAAGCTACTTAGAGGAATTCAAGTACTTTGGAATCAAGCTCAAAGGTTTAGCTGAGGCCGCTGAAAATTATCACGTAGTTCTAACAGAAAATAGGAAATTGTATAATGAAGTTCAGGATTTGAGAGGAAATATCAGGGTATATTGTCGAATTAGACCGTTTCTTTCGGGGCAAAACCAAAATCATACAACAATGGAGTTTGTTGGTGATGATGGAGAACTAATTGTTAGCAATCCTCTTAAACAAGGAAAAGAAAGTCGCAGGCTTTTTAAATTTAACAAGGTTTTTGGTCAAGCAGCTAGCCAAGAGGAAGTATTCGTGGACACTCAACCGCTAATTCGTTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACATATACAATGAGTGGACCTAGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAAAGTAGGAGAAGCTCTATTGTTTACGAAGTTGGAGTTCAAATGGTTGAAATTTATAATGAACAAGTTCGTGATTTACTATCGAGCAATGGTCCTCAAAAGAGACTTGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATGCTGTGAATTCAATGACAGATGTCTTAGAGTTGATGAATACTGGGCTGATGAATCGGGCAACTAGTGCTACAGCCTTAAATGAAAGAAGTAGTAGATCTCACAGTGTTCTCTCTGTTCATGTTCGAGGAACGGAATTGAAGACCAACACTCTATTGCGTGGATGTCTGCATCTTGTAGATCTTGCTGGAAGTGAAAGAGTGGATCGTTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAGCATATAAACAAATCACTATCCGCACTTGGAGATGTGATAAATGCTCTAGCACAAAAGAGTCCACATGTGCCGTATAGAAATAGTAAATTGACTCAACTTCTTCAGAGTTCGTTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAGCTTAATCCGGATGTTGCTTCATATTCTGAAACTATAAGCACCTTGAAATTTGCTGAGAGGGTTTCTGGTGTCGAGTTAGGTGCTGCTCGTAGCAACAAAGAGGGAAGAGATGTGAGAGAACTTATGGAGCAGTTGGCATCTCTCAAGGATGCTATTGCAAGGAAGGATGAAGAGATTGAGCGGTTGCAGTTGCTCAAGGCTAATCACAATGGTCCAAAGCTTGGTTTGATCCCGCTAAGGCATGGGTCATCATCTCCAAGGAGACATTCCATAGGGACTCCTCGACATAGCAAGAGAGTTTCAGGAGCAAGGAGCTATGGAGTCAATGATAAAGCAGCTTCTGACATGGACAACTGCTCAGAGTATAGTGATAAGAATTCGGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGCCCAGTTCCCTACGGTTGAAATTGGCTAGAGAAGATATCGGTCAAAATTTCAATGAGGACATTGAACTGCTAAAATTTGGAGATGCGGATTCAGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTATACCCTTTTCCCTGAACTTGAGAAGGCAGCTGAAACTACACCAGCTAAGAACATCACAGCCGACAACGTTCCAGCTGAGAGCTCGGAAAAGCTCATTATGCCATCCAAAATTCCCAAAGCTCCACAAGACCAGCCAAAACTGCAGACTAGACCTTCCAGACTATCATCATTGAGCAGAAGCTCCTCAAAGGTTTTGTCAAGTATTAGAAAACCCACGGTCAGTAGCTCTTCTTCGGTGAAGCCCCCCAAACGATGGCAATAG 3282 0.4119 MQWEQEGGGKGGTDNLNGFPRGGVNQRDTLGGIVEGSQLASLVKWINAVLPNFNLPLETSEEEFRLWLRDGSILCSILDKLVPGSMEGSGSLNEPVSVKRFLVALNELGLSGFELSDLEQGSTVPVLQCLETLKTHFAYNAARENIQSCSRKRWDQSNLTYLEETDGFLKDASTFQHAIDNSVVSGGIASTDPIGLKSNELCQLKRGSHMDLSDAKLNELLKSNNLDSVSTQFLFNIGNRILSDIFERKNEDVPQGQRAACLLRKILQVIESRFSNQAESMKNQNNLFKAREGKYQTRINVLETLAVGTNEENEVVASWVQQLKLSLQLEQTKLEEKKKLEEQDFSRLKKDKVRNEIEISALKQDLEMAKRAHEEHVSQLELQATESKAEYEKRIEELKCHLADAKKQVKEQETFLESRYLNWKNKEHTYQSFVNHQFKAFKELRAAMKSVKNEVTKTKRSYLEEFKYFGIKLKGLAEAAENYHVVLTENRKLYNEVQDLRGNIRVYCRIRPFLSGQNQNHTTMEFVGDDGELIVSNPLKQGKESRRLFKFNKVFGQAASQEEVFVDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQSRRSSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMHAVNSMTDVLELMNTGLMNRATSATALNERSSRSHSVLSVHVRGTELKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVINALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQLASLKDAIARKDEEIERLQLLKANHNGPKLGLIPLRHGSSSPRRHSIGTPRHSKRVSGARSYGVNDKAASDMDNCSEYSDKNSEAGSHQSMDDFRNKPSSLRLKLAREDIGQNFNEDIELLKFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPELEKAAETTPAKNITADNVPAESSEKLIMPSKIPKAPQDQPKLQTRPSRLSSLSRSSSKVLSSIRKPTVSSSSSVKPPKRWQ* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00552 1093 Gene3D - 35 141 IPR036872 -
Rops2g00552 1093 Coils Coil 320 415 - -
Rops2g00552 1093 Pfam Calponin homology (CH) domain 41 137 IPR001715 GO:0005515
Rops2g00552 1093 Coils Coil 845 875 - -
Rops2g00552 1093 ProSiteProfiles Kinesin motor domain profile. 503 831 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00552 1093 Pfam Kinesin motor domain 509 829 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00552 1093 ProSiteProfiles Calponin homology (CH) domain profile. 36 138 IPR001715 GO:0005515
Rops2g00552 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 869 IPR027417 -
Rops2g00552 1093 MobiDBLite consensus disorder prediction 1052 1093 - -
Rops2g00552 1093 Gene3D Kinesin motor domain 444 833 IPR036961 -
Rops2g00552 1093 Coils Coil 441 461 - -
Rops2g00552 1093 MobiDBLite consensus disorder prediction 1 21 - -
Rops2g00552 1093 MobiDBLite consensus disorder prediction 1020 1093 - -
Rops2g00552 1093 SUPERFAMILY Calponin-homology domain, CH-domain 39 137 IPR036872 -
Rops2g00552 1093 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 445 833 - -
Rops2g00552 1093 MobiDBLite consensus disorder prediction 880 946 - -
Rops2g00552 1093 SMART kinesin_4 501 839 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00552 1093 PRINTS Kinesin heavy chain signature 781 802 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00552 1093 PRINTS Kinesin heavy chain signature 732 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00552 1093 PRINTS Kinesin heavy chain signature 578 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00552 1093 PRINTS Kinesin heavy chain signature 701 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00552 1093 PANTHER KINESIN-LIKE PROTEIN KLP-3 346 1048 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00552 Rops-Chr2 7975566 7983781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00552 391 831 Calmodulin-binding Proteins AT5G65930 37.832 1.78e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00552 K10406 - gmx:100812813 1739.93