Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00547 ATGGCGAGAAGATCTCTTCCTCTGGTTAACCAAAAATGTGAGACAGGTTGCACATGGCGAATGCTTGGAATATTCAATCTTCGTGAAGGTCATTCTGACAAAAGATTGGTTTCCAATAGGAGGCATTTGAATACACATGCCACAGCTGCAGGAAATGGAAACTCGAGAAGTAGCTCAGATGTGCCTAGCACAATTGATGAAAAGTACCCTCACATTAGTGTAAGTTCCAGAAGAAGTAGAGATTATGGTTGTAAAAGTATCAGTTGCATGGAGAATGATCAGGTAGCAGATTGGGGAAATGAAGTAACAAAGATGCTTGTTGATCAGAGATTTTTCAACAAAAATTATCAAGACAAAGATGGGGAAGGCTATCAGCCTAATCAATTCTTGGATGCTTTACAGATTTTACATTCAAACAAGGAACTTTTCATTAAACTTCTGCAAGATCCAAACTCTCTGTTAGTAAAGCAAATTCATGACTTACAGAGTTCTCAAGTAAAAGAACCATGTCAGGCAAGGCAAAAAAGGATGACTAGATTGAATAAATATCAAAACAGTAATTCTAGACAGTGTGTAAAACCTTTTAAAACCTTTGATAGATATGATTCGAGTTCAAATTGTGAGCCCTCAAAAAGAATAGTAGTTCTGAAGCCTGGCACAATTAGTGTGAAAAATTTTGCTGACACTAGCCTTGGCTGTCCTCGGCAAAATGTTAAGCCTTCACATTTTCCCTTTGGTCGTATAAAGAGAAAGTTGACGCATGTAATGAGAGTAAGGAGAAAAGAACAGCAGTGTAGGACAACTAATGGAGTGCCATGTAAATTTCCCTGTGGTTCCCAGGGCTTGGAAGATGGTAAAAAAGTAGAAGAATTGGAAATTGCAGGAAGAAACTCACCTATTAATGTCCATGCTAGTATTGGAAAAAGGTCAAATTCATCGCTTGATTTGAGGAAGAGAGACAAGATTATCAAGTTGAAGGATTCTGAGCTATGTATGGGACTGGAAACTGCTTCATTTGGTGAAAGTTGCAGTAAGAACACAAATAATACTTCAGTTAGTCCTTCTGAGCAAAATATATTGAGCATACGTGTTGATGGTAGGAAAGGTTCATCTCCGATGTTAAACTGTGGAATTGAGGAATGTAATCAGTGCACGAACTCTCTTGAGAGAACAATTCCTCTTCCTGACTCTCTGTCCTTGCCAAGCTTGAGGAGGTACTGTGAGCACGGCTCAGTCACTGAAGAAATGATGAGATATCATAACAACAATCAAATGGTCCTTAGAACCAAGTTGGGGCTTCAGAAAGATAAGGAAAATGGTTTATATAGTTCTTCTGGTCAGAAAATCAAGGATCCACCACCAATGGCCACTGTCAATACACTTAGTGATGAGTTGCAGCTTGTTGGTGCAGATATTAGTATCACAAAGAGTCTTTATGGGAACAATTTGCATGCACATTATGATATTCCTAGAGATGGTGGATACAAGGACAGTTCTACTCAGAACTTTGACATAAATAATACAACCGGAGGACTTGAATCTTTTCTGGATTCAAATCCAGAGATACAGATTTTGTCCTTTTCACCAGACATTGCTTCATCAAACCCATCATCCTTTCAGAGAATAGAAGATACTGTAAACACAAGAAACAAAGTTGAGCACCCCAGTACTGAACCTGTTGTCACCAACCCACCAATACTCATCTTTCAACCAGATGAGTCACCAGTACAAGTAATGCATGATAAATTTGAAGAGAACCATTTTGCAGACCTTATAAGATCCTCTTTAGATCCAATAAACAATTTAACCTCTTCCAAGAATATCTCAGACTACATAAGGGAAATTTTTCAAGCTTTCAACTTGAAATGGGATGAACTTACTATGAAGAATGATTCATGGGACCTATTGCTGGATCCATCCACCTTTGCTGAACTCAAGGGATTGACTTGCCAACTTTGTGACACTTCAATCTTGCATGACTGTGTCATCGAAACTGTCATGGAGGTATACAAGAACTGTGGTTTCCCACCTCATTTGTCATCAAAAAATCCAAACGTCCAAGCTTGTGTTGGAAAGAAACTTCTGCTTAAAGAGATAACAGAACTTGTTGACTTGCACTTTTTCCCTCATCCATCACCTTTGACATTACAACAGCTTGTTGAAAAGGACTTAGCAAGACATGGATCATGGCTAAATATCCAAGTTGATGCAGAAGACGTTGCAATAGAGGTGGAGAAAGATGTGCTGGGAAAACTGGTTTTGGAAATCGTATCTGAAATGGATATCAGAGAAATGAGACAGAGCAATGAGCCAATATCAACTTACTAG 2328 0.387 MARRSLPLVNQKCETGCTWRMLGIFNLREGHSDKRLVSNRRHLNTHATAAGNGNSRSSSDVPSTIDEKYPHISVSSRRSRDYGCKSISCMENDQVADWGNEVTKMLVDQRFFNKNYQDKDGEGYQPNQFLDALQILHSNKELFIKLLQDPNSLLVKQIHDLQSSQVKEPCQARQKRMTRLNKYQNSNSRQCVKPFKTFDRYDSSSNCEPSKRIVVLKPGTISVKNFADTSLGCPRQNVKPSHFPFGRIKRKLTHVMRVRRKEQQCRTTNGVPCKFPCGSQGLEDGKKVEELEIAGRNSPINVHASIGKRSNSSLDLRKRDKIIKLKDSELCMGLETASFGESCSKNTNNTSVSPSEQNILSIRVDGRKGSSPMLNCGIEECNQCTNSLERTIPLPDSLSLPSLRRYCEHGSVTEEMMRYHNNNQMVLRTKLGLQKDKENGLYSSSGQKIKDPPPMATVNTLSDELQLVGADISITKSLYGNNLHAHYDIPRDGGYKDSSTQNFDINNTTGGLESFLDSNPEIQILSFSPDIASSNPSSFQRIEDTVNTRNKVEHPSTEPVVTNPPILIFQPDESPVQVMHDKFEENHFADLIRSSLDPINNLTSSKNISDYIREIFQAFNLKWDELTMKNDSWDLLLDPSTFAELKGLTCQLCDTSILHDCVIETVMEVYKNCGFPPHLSSKNPNVQACVGKKLLLKEITELVDLHFFPHPSPLTLQQLVEKDLARHGSWLNIQVDAEDVAIEVEKDVLGKLVLEIVSEMDIREMRQSNEPISTY* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00547 775 MobiDBLite consensus disorder prediction 46 64 - -
Rops2g00547 775 Pfam Domain of unknown function (DUF4378) 610 755 IPR025486 -
Rops2g00547 775 Pfam Protein of unknown function (DUF3741) 108 152 IPR022212 -
Rops2g00547 775 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 92 - -
Rops2g00547 775 MobiDBLite consensus disorder prediction 46 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00547 Rops-Chr2 7934141 7939465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00547 610 758 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 30.667 2.77e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00547 - - gmx:100813885 952.199