Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00541 ATGCCGTCATGGTGGGGAAAACCTTCATCCAAAAAGGTGAAGAGAAAGGCAAACAAGGAAAATATTCTTGATACCATACAACGGAAATTAAAGATTGCTTCTGAAGATAAGTGCAACGACAAATCAGGAAGATTTAAAAGACATGCTAGTGACGTGATTTCGGATAAAGGATTTAGATCCACTATACCTTCAAGATCACCATCACCCTCTACACATGTGTCCCGCTGTCAAAGTTTTGCAGAAAGACATCATTCTCAGGCACTCCCATTGCCAGGCTTGCACCTTCCTAATGTCAGTGATGCAAATTCTGGAAGTATTTTAACATCAAAACTGGAAAGAGCCAGAGGCTCTAAACCATCTGTGTATTTTCCCCAGCCAAAACCTGGTCATGTATCTAACAGAGGAGATCCTACAGATGCCGAAAGAGATATAGCCACCACATCTGTTTCTAGTGACAGCTCTATTGATAGTGGTGACTCTTCTGATTCACATCTTGTTAGTCCTCTGGCATCTGACTGTGAAAATGGAAACAGAGCCACCATTTACAGTTCTTTCAGTGTGGTGCACAAGGATCAGTCATTTATTACTATCGAAAGAATCTCAAGAGCTTCCTCAAAACCAGCTCCTCAATTGTGCAATAATGAGCTTATATCTACCTCACCAAAAAGGGTTCCTTCGCATCTGCGAAATCTGCAAATAGCTCATCCAGGTGGTTTGTGCAGTGCTCCAGACAGTTCCATGTCAAGTCCTTCTAGAAGTCCGATGAGAGCATTTGGTCCTGAGCAAGTGTTGAACACTGGATTCTGGACAGGAAAGCCTTATCCAGATACAGCTTCTGGGCAATGCTGTAGTCCGGGTTCAGGCCATAATACAATTGGTAGGGATCTGTCAGGACAGATGATTTGTCCACACAACAGGTGTAGCCCTGAGTATTCTCCAATACCTAGTCCCAGAATGACAAGCCGAGGTCACAGTTCCAGAATACAGAGTGGTACTGTCACCCCTCTACATCCACAAGCTGGAGGTGCTGCAGCAGAATTGCCTACAAGACGTCCTGATGATTTGAAACAACAAACTCATCGGTTACCACTTCCTCCAATAACAGTCGCTAAATCTTTTCCATTTTCTCCAACATATTCTGCATCCACAACTCCTTCAGCCCCTCGTAGTCCTGCTGGAGCAGAAAATCCAACAAGCCCAGGTTCACGCTGGAAAAAGGGGCAGTTGCTTGGAAGGGGAACGTTTGGGCATGTATACCTTGGTTTCAACAGAGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTTACCCTTTTTTCAGATGATGCAAGATCGAGGGAGTGTGCACAGCAACTTGGCCAAGAAATTGCACTGCTAAGTCGGTTATGGCATCCGAATATAGTCCAGTATTATGGATCTGAGACGGTAGATGACAAACTGTATATATATTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTGGTTCAAGAATATGGCCAATTAGGTGAAATTGCCATTCGTAATTACACTCGGCAAATTCTGTCTGGACTTGCTTATTTACATGCTAAGAACACTGTTCACAGGGACATAAAAGGGGCAAACATATTGGTGGACCCTAATGGGCAGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATAAGTGGGCAGTCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTAATAAAAAATCCAAATGGTTGTAATCTTGCTGTTGATATATGGAGTCTGGGATGCACTGTTTTGGAGATGGCAACAGCAAAACCTCCTTGGAGCCAGTACGAAGGGGTTGCTGCTATGTTTAAGATTGGGAACAGCAAGGAACTTCCTACTATTCCAGATCATCTATCAGAAGATGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGGAATCCACTAAAGCGTCCCTCTGCTGCTCAACTTCTAGAGCATCCATTTGTTAAAAATGCCATGCTGGAAAGACACATGCTGACTGCTGACCCTTCAGTAACACCTGCTGCTGTTATAAATGCAGTGAGATCTCTGGCCAATAGATCTGCAAAACCTAATTTATGCTTAGACTCAGAAGTGGCTGGTGTCTATCCGTCTAGAAGCTCGAGAGCTGGTTATGGATCAAGTGATGCACGTACCCCAAGGAATATATCATGTCCCGTTTCTCCTTCTGGGAGCCTAATTTCTCCTAAGTCATTGCATGCGAGTGGAAGGATGTCTCCCTCTCCAATATCTAGTCCTCATACGGCATCTGGCTCATCCACACCGCTCACCAGTGCTGGTGGTGCCATCCCATTTCATCAAACAAAGCAACCAATTTTCTCATATGAAGCTGGGGGCATTATCCAAAAGTTCCAGAGTGGTTTATATTCAAATGTAAACACTGCTTCTCAGGGGTCAAAGCATGACCAATTTTGGAGAAATACGCCAAATACACATGCTTCTCGGGATATGATTTCATCTGATAATGACTTTCTTGCAAACCATAATAGGAAGGCTGTCCAGGGAGACCCAGAATTTCGTGATGGGAAGCCATATGTGGCTAATTGGGTTACACAACAACTGCTGAGGGATTATGCACGGCTAAATGCATCACTAGGTAAGCCGGGTACCCCAATGCTTGGTCGCAAAAATGGCCATGATCTGCATGTCAGTGATCAGATGGATACACCAGACATGTGA 2712 0.4403 MPSWWGKPSSKKVKRKANKENILDTIQRKLKIASEDKCNDKSGRFKRHASDVISDKGFRSTIPSRSPSPSTHVSRCQSFAERHHSQALPLPGLHLPNVSDANSGSILTSKLERARGSKPSVYFPQPKPGHVSNRGDPTDAERDIATTSVSSDSSIDSGDSSDSHLVSPLASDCENGNRATIYSSFSVVHKDQSFITIERISRASSKPAPQLCNNELISTSPKRVPSHLRNLQIAHPGGLCSAPDSSMSSPSRSPMRAFGPEQVLNTGFWTGKPYPDTASGQCCSPGSGHNTIGRDLSGQMICPHNRCSPEYSPIPSPRMTSRGHSSRIQSGTVTPLHPQAGGAAAELPTRRPDDLKQQTHRLPLPPITVAKSFPFSPTYSASTTPSAPRSPAGAENPTSPGSRWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLFSDDARSRECAQQLGQEIALLSRLWHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLVQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGQIKLADFGMAKHISGQSCPFSFKGSPYWMAPEVIKNPNGCNLAVDIWSLGCTVLEMATAKPPWSQYEGVAAMFKIGNSKELPTIPDHLSEDGKDFVRLCLQRNPLKRPSAAQLLEHPFVKNAMLERHMLTADPSVTPAAVINAVRSLANRSAKPNLCLDSEVAGVYPSRSSRAGYGSSDARTPRNISCPVSPSGSLISPKSLHASGRMSPSPISSPHTASGSSTPLTSAGGAIPFHQTKQPIFSYEAGGIIQKFQSGLYSNVNTASQGSKHDQFWRNTPNTHASRDMISSDNDFLANHNRKAVQGDPEFRDGKPYVANWVTQQLLRDYARLNASLGKPGTPMLGRKNGHDLHVSDQMDTPDM* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00541 903 Pfam Protein kinase domain 405 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00541 903 MobiDBLite consensus disorder prediction 1 20 - -
Rops2g00541 903 ProSiteProfiles Protein kinase domain profile. 404 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00541 903 MobiDBLite consensus disorder prediction 712 769 - -
Rops2g00541 903 Gene3D Transferase(Phosphotransferase) domain 1 402 686 - -
Rops2g00541 903 Coils Coil 16 36 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 314 336 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 878 903 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 38 81 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 312 406 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 113 170 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 38 54 - -
Rops2g00541 903 SUPERFAMILY Protein kinase-like (PK-like) 402 734 IPR011009 -
Rops2g00541 903 MobiDBLite consensus disorder prediction 143 170 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 373 403 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 57 76 - -
Rops2g00541 903 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 64 682 - -
Rops2g00541 903 ProSitePatterns Protein kinases ATP-binding region signature. 410 433 IPR017441 GO:0005524
Rops2g00541 903 CDD STKc_MEKK1_plant 403 660 - -
Rops2g00541 903 MobiDBLite consensus disorder prediction 710 769 - -
Rops2g00541 903 SMART serkin_6 404 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00541 903 MobiDBLite consensus disorder prediction 889 903 - -
Rops2g00541 903 FunFam Mitogen-activated protein kinase kinase kinase 402 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00541 Rops-Chr2 7897573 7904430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00541 1 888 MAP Kinase Kinase Kinase AT1G63700 57.773 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops2g00541 Pkinase 9.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00541 K20717 - gmx:100814422 1186.4