Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00540 ATGGATGCATCAACGGCTTTAATTATCTTATCAGCAATAGCAGCCTATTTAATATGGTTCAAATTCATAACTCGACCACTCAGAGGTCCACGTGTCTGGCCCCTATTGGGTAGTCTCCCTGGTCTCATCCAACATGCCAACCGCATGCACGACTGGATCGCTGAGAATCTCCGCGCGTGTGGCGGCACGTACCAAACCTGCATTTGTGCCATCCCTTTCCTTGCCAGGAAACAGTGCCTCGTGACTGTCACGTGCGACCCCAAGAACCTCGAGCACATCCTGAAACTCCGTTTCGATAACTACCCCAAAGGCCCAACATGGCAGGCCGCGTTTCATGACTTGCTCGGGGAAGGTATCTTCAACTCAGATGGTGAAACGTGGCTGTTCCAGCGTAAGACTGCCGCACTGGAATTCACCACTCGAACCCTTCGTCAAGCCATGGCGCGTTGGGTTAACCGAGCCATAAAACACAGGTTCTGCCCCATCTTAGCCGCGGCTCAGGAAAATAACAACCCAGTGGATCTCCAAGATCTCCTTCTTCGGCTCACTTTTGACAATATATGCGGCTTGGCTTTCGGTCAAGACCCACAAACCCTCTCTGTTGGGCTTCCAGAAAACGGCTTCGCGCTTTCCTTCGACCGAGCCACTGAAGCCACCTTGCAACGCTTCATTTTGCCCGAGATAGTGTGGAAGTTCAAAAAATGGCTTCGGCTTGGAATGGAAGTGAGCTTAAGCCGAAGCCTGAAACACATTGATCAATACCTCTCCAACATCATCCAGAAACGGAAACTTGAACTGCTTAACAAACAGAGCAACGGTGGGGCCCTCCACGATGACCTACTGTCACGGTTCATGAAGAAAAAGGAATCCTACTCCGAAGAGTTCCTCCAACACGTGGCACTCAACTTCATCCTCGCCGGACGTGACACGTCATCGGTGGCTCTCAGCTGGTTCTTCTGGCTCTGCATCAAAAACCCTAGCGTCGAGGAAAATATACTCCTTGAGCTCTGCACCGTTCTGATGGAGACACGTGGCGGAGATGTCTCCAAGTGGTTAGATGAACCTCTGGCATTTGAAGAGGTTGACCGTTTGGTTTACCTCAAAGCAGCACTATCTGAGACGCTGCGGCTTTACCCCTCCGTGCCGGAGGACTCCAAACATGTCATAAACGACGACGTTTTGCCAAGCGGAACATTCGTCCCTGCGGGTTCAATGGTGACTTATTCAATTTACTCTGTTGGGAGGATGAAGTTCATTTGGGGTGAGGATTGTCTTCAGTTCAAACCCGAACGGTGGCTCTCCGATGATGGCAACAAGATTCAGATGCAGGACAATTACAAATTTGTCTCGTTCAATGCGGGACCCAGGATTTGCTTGGGTAAGGACTTGGCTTACCTTCAGATGAAGTCCATAGCCGCGTCGGTGCTGCTGCGCCACCATCTCACAGTGGCGCCGGGGCACCGTGTGGAGCAGAAGATGTCACTCACGCTGTTCATGAAGTACGGTTTAAAGGTGAATGTGCACCCTAGAGATCTCACACCGGTGCTGGAAAAGTTAACCAGCAATGCAGTGAAGATAAAGGAAGCTGGCTCTGTTGCTTAA 1602 0.5094 MDASTALIILSAIAAYLIWFKFITRPLRGPRVWPLLGSLPGLIQHANRMHDWIAENLRACGGTYQTCICAIPFLARKQCLVTVTCDPKNLEHILKLRFDNYPKGPTWQAAFHDLLGEGIFNSDGETWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILAAAQENNNPVDLQDLLLRLTFDNICGLAFGQDPQTLSVGLPENGFALSFDRATEATLQRFILPEIVWKFKKWLRLGMEVSLSRSLKHIDQYLSNIIQKRKLELLNKQSNGGALHDDLLSRFMKKKESYSEEFLQHVALNFILAGRDTSSVALSWFFWLCIKNPSVEENILLELCTVLMETRGGDVSKWLDEPLAFEEVDRLVYLKAALSETLRLYPSVPEDSKHVINDDVLPSGTFVPAGSMVTYSIYSVGRMKFIWGEDCLQFKPERWLSDDGNKIQMQDNYKFVSFNAGPRICLGKDLAYLQMKSIAASVLLRHHLTVAPGHRVEQKMSLTLFMKYGLKVNVHPRDLTPVLEKLTSNAVKIKEAGSVA* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00540 533 FunFam Cytochrome P450 21 513 - -
Rops2g00540 533 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 PANTHER CYTOCHROME P450 21 505 - -
Rops2g00540 533 SUPERFAMILY Cytochrome P450 29 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 Pfam Cytochrome P450 28 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00540 533 CDD CYP86A 67 503 - -
Rops2g00540 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00540 Rops-Chr2 7868580 7870845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00540 1 519 Cytochrome P450 AT4G00360 75.192 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00540 K15398 - gmx:121174913 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00540 2 7868580 7870845 Rops2g00540 2 7868580 7870845 ECH