Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00532 ATGGCAGGATGGTCAGCTTTCTCAAAGGGGTCTTCCTTGGATTGTGTTGGAGTTGAAACTAATGGTGCATTTCATGGTAATGGATGTTGCCTTGTAGAAGATCATGTTGAGGGTGCTGACCATGACAAAGTTAAACAAAAATGTTTGTTTTATCAACTTTTCCCGGTTTACCTCAAGGAGAGTTCTTCTAAAGGCATTGTTAGGCCTGTGCCGGTGTTGCTTGGCGATGGTAAATTGCTAGATTTGTACAAGTTGTTCTCCCTTGTGAAGGAAAGAGGAGGGTATGCCGTGGTGTCGAGAAAAGGATTGTGGAGTTATGTGACAAAGGAATTGGGTTTTGACCTCCAAGTTTTGGCTTCGGTAAAATTAGTTTATGATAAGTATTTGACTGATTTTGAAGGTTGGCTCAGGAAAACTTTTGAAGAGAAGAATTTCAAAAATGGGGGTTTTAAGTCGTTGCCATTAGATCTAGAGAAAGAGTTTAGAGGTCTATTATCCTCAAATATAGAGGACATAGATGATGAACTTGTTCAATTAGAATCAAATAAACTTATAAAGTACATTGATTTGGCTAACCACAAGAGTGATACTCATTCATTGGATGCCGAAAATAAAAATAATAAATGTGAGGATGTCCCACATGTTGATGGCGATGATGATGAAAAATTATGTAATGGTGTTAAGAATGATCCTGCTACCTCGGGTGTTGAAATTGCTGAGGAGGAATGTAACTCTCGCAAACGCAAACGGGAAACATTGTCAGGAATGCTAAACTGGATGAGGCATATTGCTAAGCATCCTCTTGTTCCTTTAACTCAGCCAGTACCCAAACCATCAACGTGGAAGGAATATAAAGGCCAGGGCTTTTTTATTCATGTACTGAGGGCAAGAGAGGTTCTGTTGCAGAGACAGCATGTAGAACCAAACAGTGGACCATCTTCATCACAGAAACTGAGGATGCATCCTGCCATGTATGAGGATCATGTTGCTCCTGGTCACCATGGTACAGTGAGATTGAGATGTAGTGAAAGGCTGCCTACCTCTGTTAAATCTCGCATGTGCCCTTGCTGTAATTCTTGTTCTGATAATGGAAATAGATCGTCAAGTTCAGTCAATATGGGGGCAGAAAAATGTTCTCTGGAGAAAACAACTGAAACACTAGATTCGGCGACTGAACAGATAATAGCTGAACCATCTGGGGATGATTTTGTCGAAAAGCAAGTTTCTATAGGTCCTCTTTTCCAAGCAGAAGTCCCACAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGTTAGGCACACGAGTATGGCCTTTGAAACATGACTCAAAACCTACTATTGAAACAGGTCTTACTGAGAGAGGAAGACAAGAGAAGTGTAGCTGCCAAGTTCAAGGTTCAGTTGAGTGTGTTAGATTTCATACTGCTGAAAATAGGATGAAATTGAAGGTTGAACTGGGTTCTGTATTTTACCATTGGGGATTTAATCATATGGGTGAGGAAGTTTCACTTCGATGGACAACTGAAGAAGAAAAGAAATTTAAGGCTTTGATGAGGTCAAATATTCCCTCCCAAAATAGGTCTTTTTGGAACAATTCATCCAAATACTTTCCAAAGAAGACAAGAAGAAATTTGGTGAGCTATTACTTCAATGTGTTTCTTATTCAACTAAGAAGCTATCAGAATCGTGTGACTCCAAAGAGTGTTGACAGTGATGATGATGAAGTAGAATTTGGATCTTTAGGTGATGGGTTTGGGATGGAAGCTGTCAAGGATCCAGATATTAATTTCCTGGAGTGTTCAGAGAACAAGCAGTGCATTGATTTGGAGTGA 1836 0.3998 MAGWSAFSKGSSLDCVGVETNGAFHGNGCCLVEDHVEGADHDKVKQKCLFYQLFPVYLKESSSKGIVRPVPVLLGDGKLLDLYKLFSLVKERGGYAVVSRKGLWSYVTKELGFDLQVLASVKLVYDKYLTDFEGWLRKTFEEKNFKNGGFKSLPLDLEKEFRGLLSSNIEDIDDELVQLESNKLIKYIDLANHKSDTHSLDAENKNNKCEDVPHVDGDDDEKLCNGVKNDPATSGVEIAEEECNSRKRKRETLSGMLNWMRHIAKHPLVPLTQPVPKPSTWKEYKGQGFFIHVLRAREVLLQRQHVEPNSGPSSSQKLRMHPAMYEDHVAPGHHGTVRLRCSERLPTSVKSRMCPCCNSCSDNGNRSSSSVNMGAEKCSLEKTTETLDSATEQIIAEPSGDDFVEKQVSIGPLFQAEVPQWTGVVSESDSKWLGTRVWPLKHDSKPTIETGLTERGRQEKCSCQVQGSVECVRFHTAENRMKLKVELGSVFYHWGFNHMGEEVSLRWTTEEEKKFKALMRSNIPSQNRSFWNNSSKYFPKKTRRNLVSYYFNVFLIQLRSYQNRVTPKSVDSDDDEVEFGSLGDGFGMEAVKDPDINFLECSENKQCIDLE* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00532 611 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 41 606 - -
Rops2g00532 611 SMART ARID_2 41 133 - -
Rops2g00532 611 CDD ARID 82 133 - -
Rops2g00532 611 SMART bright_3 45 138 IPR001606 GO:0003677
Rops2g00532 611 CDD SANT 506 554 IPR001005 -
Rops2g00532 611 Gene3D - 33 147 IPR036431 GO:0003677
Rops2g00532 611 ProSiteProfiles ARID domain profile. 44 137 IPR001606 GO:0003677
Rops2g00532 611 SUPERFAMILY ARID-like 44 138 IPR036431 GO:0003677
Rops2g00532 611 Pfam ARID/BRIGHT DNA binding domain 56 133 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00532 Rops-Chr2 7755420 7765752 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Rops2g00532 ARID 4.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00532 - - gmx:100819320 825.854