Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00527 ATGTCTTCTAATCTCTTTGCCTTTGGCACTACTTTCCACACACATTCAAGCTCAGACTTGGTCTCCTCTGATGGAGTTGGAGACCTTCCCTTTTTCTCAGACCCTTTCCCTTTCTTCAACAACTCTAACACTGATATAACTCAACAGAATTCAAACCCATTTGATGAAGCTCAAGCTCAAGCTCTTTCTTCTATTGACCCTTTTTCTCCTTCTTTTTTCTCTTTCTCTCCTCCAAATTCCCACTTGGAAAACCTCACCCTTTATCAGGCTAACCGTGTGTCAAATGGCACAAAGTTAGCAAGTGAAATGGGAAGTTTCTCATCTTTTGATGGGTCAGAAGTGAAAATTGAGGAATCTCTAATGGGTGTTGATTATATTTGCAATAAGAAATTCCTTCCTCATAGTTACAGTGGTGCTGAAAGTATTTCCAAGTACATGCAAAGAAGCTTTAGTAGTAACTCTTTCGAAAGGAAGCCTGGTTTTTCATTCCAACCACACCGTGATGCTCTTGTGGATTCCCCAAAATTTCATAACCAAGACATGGGTTCCCCTGAAAACAGTGTCTTCTCTGGTCAAATGAGGAGGGTGTGTAGCACAGGAGATTTGCAGAACATGAAAGCAAATCACATATCTCTAACGGAGGGGCCGTTGTTGGAGGAACCAAACTTTAAAGTAGGGCGTTACAGTGCTGAAGAAAGAAAAGAAAGAATTTCTAAATACAGAGCCAAGAGAAACCAGAGGAACTTCAACAAAACCATTAAGTATGCATGTAGAAAGACACTAGCCGACAATCGACCACGCATACGTGGAAGGTTTGCACGCAACGATGAGACTAACGAGATTCCCAAGGCTCCGAGTTCAATCAGAGATGAAGACGAAGTTGATTTCTGGATTGGTGAATTGCGGTTGCATGAAGAGCAAGACGATGTAACAGTGGGAGCAGAACAATTTGTTCGGTACTGTGGCTTTTGA 972 0.4187 MSSNLFAFGTTFHTHSSSDLVSSDGVGDLPFFSDPFPFFNNSNTDITQQNSNPFDEAQAQALSSIDPFSPSFFSFSPPNSHLENLTLYQANRVSNGTKLASEMGSFSSFDGSEVKIEESLMGVDYICNKKFLPHSYSGAESISKYMQRSFSSNSFERKPGFSFQPHRDALVDSPKFHNQDMGSPENSVFSGQMRRVCSTGDLQNMKANHISLTEGPLLEEPNFKVGRYSAEERKERISKYRAKRNQRNFNKTIKYACRKTLADNRPRIRGRFARNDETNEIPKAPSSIRDEDEVDFWIGELRLHEEQDDVTVGAEQFVRYCGF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00527 323 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Rops2g00527 323 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 50 295 IPR045281 GO:0009909
Rops2g00527 323 Pfam CCT motif 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00527 Rops-Chr2 7685680 7688005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00527 229 280 C2C2-CO-like Transcription Factor Family AT5G24930 53.846 4.31e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops2g00527 CCT 6.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00527 - - gmx:102665661 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02198 1 43579500 43580818 Rops2g00527 2 7685680 7688005 PCT