Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00518 ATGGCCACGAAAGACTCAAGCTCTGCTGCTTCTGCTTCTGCTTCAGCTTCAGGGGACACTAAAATTAAAAGGGTTCTCACTCATGGTGGTAGATATGCACAGTACAATGTGTATGGAAACTTGTTCGAAGTGACCTCCAAGTATGTGCCTCCCATTCGTCCTATTGGTAGAGGTGCTTATGGCATCGTCTGTGCTGCTGTTAATTCGGATACACATGAGCAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAATATAATTGATGCTAAAAGGACATTGAGAGAAATCAAGCTCCTTCGTCACATGGACCATAAAAATATCATTGCCATCAAGGATATCATACGTCCCCCTAAAAAGGAGACCTTTAATGATGTATACATTGTTTATGAATTGATGGATACTGATCTTCATCATATAATTCATTCTGACCAACCTCTAAGAGAAGAACATTGTCAGTACTTCTTATATCAGCTGTTAAGGGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGATCTTAAGCCCAGTAACTTACTAATGAATGCAAACTGTGACCTTAAAATTGGGGACTTCGGTTTGGCAAGGACAACATCTGAAACTGATTTCATGACTGAGTATGTTGTCACAAGATGGTACCGAGCCCCAGAATTGCTCCTTAATTGTTCTGAGTACACCTCCGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCATTGTTTCCGGGGAAAGATTATGTTCATCAACTAAGGCTTATCACAGAGTTAATAGGTTCACCAGACGATGCCAGCCTTGGATTTCTCCGAAGTGACAATGCCAGAAGATATATTAGACAGCTTCAACCATACAGGAAACAAAAATTCTCAGCTAGATTCCCTAAGATGATGCCTGAGGCATTGGATCTGTTAGAAAAGATGCTTATTTTTGATCCAAACAAACGCATTACAGTTGATGAGGCACTAAGTCACCCATATCTTTCATCACTTCATAACATCAATGATGAGCCAGTGTGTCCGAGGCCATTCAGTTTTGATTTTGATCAGCCATCATGCACTGAAGAGCACATCAAGGAGCTCATATGGAAGGAATCAGTGAAGTTCAATCCAGATCCACCTAGTCAGTAA 1152 0.4089 MATKDSSSAASASASASGDTKIKRVLTHGGRYAQYNVYGNLFEVTSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHKNIIAIKDIIRPPKKETFNDVYIVYELMDTDLHHIIHSDQPLREEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYIRQLQPYRKQKFSARFPKMMPEALDLLEKMLIFDPNKRITVDEALSHPYLSSLHNINDEPVCPRPFSFDFDQPSCTEEHIKELIWKESVKFNPDPPSQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00518 383 Gene3D Transferase(Phosphotransferase) domain 1 133 362 - -
Rops2g00518 383 ProSiteProfiles Protein kinase domain profile. 49 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00518 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 47 337 - -
Rops2g00518 383 Pfam Protein kinase domain 53 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00518 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Rops2g00518 383 SMART serkin_6 49 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00518 383 Gene3D Phosphorylase Kinase; domain 1 32 372 - -
Rops2g00518 383 SUPERFAMILY Protein kinase-like (PK-like) 52 343 IPR011009 -
Rops2g00518 383 FunFam Mitogen-activated protein kinase 34 144 - -
Rops2g00518 383 FunFam Mitogen-activated protein kinase 133 362 - -
Rops2g00518 383 CDD STKc_TEY_MAPK 42 378 - -
Rops2g00518 383 ProSitePatterns Protein kinases ATP-binding region signature. 55 79 IPR017441 GO:0005524
Rops2g00518 383 ProSitePatterns MAP kinase signature. 84 187 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00518 Rops-Chr2 7542435 7547439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00518 8 378 MAP Kinase Gene Family AT4G01370 79.784 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops2g00518 Pkinase 4.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00518 - K20600 tpra:123916746 728.783