Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00516 ATGATCATTCCGGAGAAGAACCGTAAAGAGATATGCAAATACCTCTTTCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATTTGGCAAAGCACCCAGATATTGATGTGCCGAATCTGCAAGTGATTAAGCTGATGCAGAGTTTCAAGTCAAGGGAATACGTGCGTGAAACCTTTGCTTGGATGCACTATTACTGGTTCCTCACAAACGATGGCATTGAGTTCCTGAGGACTTACCTTAATCTTCCTTCCGAGATTGTCCCTGCTACTTTGAAGAAACAAGCCAAGCCACCTGGTAGACCTTTTGGTGGTCCATCTGGTGATCGCCCTAGGGGTCCACCACGCTTTGAAGGGGAGCGTAGATTTGGTGACCGTGATGGATATCGTGGAGGTCCCCGAGGACCTGGTGGTGATTTTGGAGGAGACAAGGGAGGAGCTCCTGCTGATTACAGACCCTCTTTTGGGGGTCCTGGCGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTATGGTGCGCCAACCAGCTCAAATCTTCCCTAA 540 0.4944 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPSGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGYGAPTSSNLP* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00516 179 Gene3D - 1 104 IPR036388 -
Rops2g00516 179 MobiDBLite consensus disorder prediction 112 128 - -
Rops2g00516 179 MobiDBLite consensus disorder prediction 91 179 - -
Rops2g00516 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Rops2g00516 179 FunFam 40S ribosomal protein S10 1 104 - -
Rops2g00516 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00516 Rops-Chr2 7529101 7530880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00516 1 179 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.667 3.56e-77 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00516 K02947 K09422 gmx:100500445 253.832