Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00508 ATGGATGATCTTGCATGCTTGATGGACTGGGATTTGGAAGCTATTGTGAGAGGATTCAATGGTGAAGCCCCAGCTACCACTATCATGGACGACCCACATGCTAATTTTTCTCATTTCTTTTGTGAACAAAATGAGCTTTTTCCAGAATTCTCAGAAACCACATATGTCCATGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCAGTTTTGCACCCTCTTTCATCAGAGAGCACCGTTACAAGTTCCTTAACTATCCTCAAAGAACCAGAAGAAGTCAAAGAACTTAAAGCATCAGAGAAAGTAGCTTCACAAGCTTTGCAAGTTCCAACAGTATCCAAATCTAAAAGAAGTAATAAGAAGAAGCAGAACAAGAGTGTGGTAATGAAAAAGGTGACAGAAGAAGATGGTGTTTGTGATTCATGGGCATGGCGTAAATATGGACAAAAACCAATAAAGGGTTCACCCTATCCTCGTAGCTACTATAGGTGCAGCAGTTCCAAAGGATGCTTGGCAAGGAAACAGGTTGAGAGGAGCCATTTAGATCCACAAGTTATTTTGGTCACCTACACAGCAGAACACAACCATCCTCAACCAACTCGAAGAAACTCATCAGCATGGAGAACCCGAAAGAACAATTCCATAGTTGCACCTTCAAGTACTGGTGACCTACACGCTTGTTCTTCAAATTCCTCAGCAGTAACTCAGTCTCCAAGGACACCTTTGGGGGTGGTGTCATCTAATATTGAAGATGATCAACTTGTGATAAATGTGCAACAAAGTAAGGGCTTGGAGAAAGAGAAAGAGGAAGAGGAAGATTTGCTTGAGTGGTTGAATGATTCTCAGTTAAATGATGGTTGGATTCCAAGCATAGAGCTAGAAGAACTCATAGGACTCTAG 900 0.4133 MDDLACLMDWDLEAIVRGFNGEAPATTIMDDPHANFSHFFCEQNELFPEFSETTYVHDELEELYKPFYPVLHPLSSESTVTSSLTILKEPEEVKELKASEKVASQALQVPTVSKSKRSNKKKQNKSVVMKKVTEEDGVCDSWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPQVILVTYTAEHNHPQPTRRNSSAWRTRKNNSIVAPSSTGDLHACSSNSSAVTQSPRTPLGVVSSNIEDDQLVINVQQSKGLEKEKEEEEDLLEWLNDSQLNDGWIPSIELEELIGL* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00508 299 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 248 IPR044810 GO:0003700
Rops2g00508 299 Gene3D WRKY domain 122 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00508 299 Coils Coil 261 281 - -
Rops2g00508 299 FunFam WRKY transcription factor 22 120 192 - -
Rops2g00508 299 SMART WRKY_cls 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00508 299 SUPERFAMILY WRKY DNA-binding domain 134 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00508 299 Pfam WRKY DNA -binding domain 140 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00508 299 ProSiteProfiles WRKY domain profile. 133 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00508 Rops-Chr2 7392532 7393549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00508 1 221 WRKY Transcription Factor Family AT4G23550 45.923 1.39e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g00508 WRKY 4.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00508 K13426 K13425 gmx:102667104 303.523