Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00486 ATGAACGACGCTGATGTCTCCAAGCAAATCGAACAGATGGTGAGGTTCATCCGCCAGGAAGCGGAGGAAAAAGCCAACGAGATCTCTGTCTCTGCCGAAGAAGAATTCAATATCGAGAAGCTGCAGTTGGTGGAAGCCGATAAGAAGAAGATCAGGCAAGAATACGAGCGCAAAGAGAAGCAAGTTGAAATTCGCAAGAAGATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGATGTGGTTAATTCCATGAAAGAAGCTGCATCCAAGGAACTTTTGAATGTGAGCCATCATCATCTTACGTACAGACACCTTGTGAAAGATCTCATTGTTCAGGGTTTGCTAAGATTGAAAGAACCTTCTGTCTTGTTGAGATGTCGAGAACATGACGTGCACATGGTAGAGCACGTGCTGGATTCAGCTGCACAGGAGTATGCTGATAAAGCAAATGTTTCTCCACCAGAGATCATTGTTGACAAAAATGTCTATCTTCCACCTGCACCCAGCCATCACAATACCCATGATCCCTACTGCTCTGGTGGAGTGGTGTTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACCCTTGATGCACGATTGGATGTAGTGTTCCGTAAAAAGCTTCCAGAGATCCGAAAGCAGCTCTTTGGACAAGTTGCCGCTTGA 693 0.4488 MNDADVSKQIEQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSHHHLTYRHLVKDLIVQGLLRLKEPSVLLRCREHDVHMVEHVLDSAAQEYADKANVSPPEIIVDKNVYLPPAPSHHNTHDPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVAA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00486 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Rops2g00486 230 Gene3D - 92 229 IPR038495 -
Rops2g00486 230 Coils Coil 7 27 - -
Rops2g00486 230 Coils Coil 41 61 - -
Rops2g00486 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Rops2g00486 230 Gene3D - 1 62 - -
Rops2g00486 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Rops2g00486 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00486 Rops-Chr2 6967994 6971311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00486 1 230 Primary Pumps ATPases(2) AT4G11150 75.217 3.87e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00486 K02150 - gmx:100500452 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00486 2 6967994 6971311 Rops2g00486 2 6967994 6971311 ECH