Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00482 ATGACGAACCCAATGGGTCCTCCACCTCCCAAAAACCCTAATCTTCCGAAAACTTCCATGCCTCATCCTCTAAATCCTCAACCTTCTAACCCTACCCAACCCCCACCACCACCTCCGCTGCAGCGCGATTCGAACAATTCCGATGACTCTTCTGCTCAAACTCCAAAGTTTTCTTCTCAAGGTGTGGTGGTTCCATATAAGATACCTCTATGGAGCAGTGCTCCCTCACATGAATTCTACCTCAAAGTTCTCAAGGACGATGCCATCATCGACAAATTTAATGTATTTGAGAAAGAGGCTTATATGTTTGGGCGTTTGGATTTCTGTGACTTCGTACTTGAGCACCCCACTATTTCTAGGTTTCATATTGCTAACATGAAGAAAGAAATAAAATCTATTCAAGTTAAAGATATTTCTCAAGGTGGATTAACTAAAGGTCAACATACTCAAATTGCGAGGAATGAGCAAAGAACAACACAGCTACTGGAGTATCATTATATTTCTGAAATCATAACTAGTACCCCCAAAACAACCCATTTTCTCTCCTTAGCTTATAGTGAAGGTGCTGGTTATAGGGTGTTTTTGTTACGGGACAGAGCCGACATTCTTTTTGGTCAGATCTGTGGCGGAAACTCCTCGTTCCCTGCTGCTGCTGCTGGAAGTGGAAAACTTGAAATGGAATTCCTACACATTTTCCTTTCCATTTACCTGTTTGGTTTGATTCTATGGCAAGGAAATGCTGAACCTGTTGAAGATAAGGAGGTTTTGCTTGATTTTGTGAACAAGTTCCCTGCTTCTCGGTCTTTGAATTGGAATGAGAGCACTTCCATGTGTGCTACTTGGACTGGAGTAACTTGCAATGAAGATAAGTCACGAGTAATTGCTATTAGATTACCAGGGGTTGGATTTCATGGCACTATTCCACCTGATACTATTAGCCGCCTCTCAGGGCTGCAAACTTTGAGCCTCAGATCCAATGTGATAACTGGGCATTTTCCTTCTGATTTTTCCAATCTAAAAAACTTATCTTTTCTTTATCTTCAGTTCAACAATTTGTCTGGTCCCTTGCCTGATTTCTCAGCTTGGAAGAATCTTACTGTTGTGAATTTGTCCAATAACCATTTCAATGGCAGCATTCCTGTCTCCCTTTCAAATCTCACTCAGCTTGCTGGTTTGAACCTTGCAAACAACTCTCTTTCTGGTGAAATTCCTGATCTCAAGTTGTCAAGATTGCAGGTGTTGAATTTTTCTAACAACGATTTGAATGGTAGTGTGCCTAAATCCCTTCAGAGGTTTCCTGAGTCAGCGTTCTTTGGAAATAACATTTCTCTTGGAAATTCTCCTGCCATTTCTCCGGTGCCTTCACCGGCTTATGAGCCATTTTCAACATCTAAGAAACATGGAAGGCTCAGTGAAACGGCACTGCTGGGAATTATTGTTGCTGGTAGTGTTCTAGGCCTTGTAGCATTTGTCCTTTTAATTTTTGTGTGCTGCTCAAGAAGGGATGAAGATGAAGATGAAGCCTTCAGTAGTGGAAAGTTGCGGAAGGGAGGAATGTCTCCGGAAAAAGCAGTCTCAAGGAACCAGGATGCAAATAATAAACTGACATTCTTTGAGGGATGCAATTATGCCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTACTTGGAAAGGGAACATTTGGTACTGCATACAAGGCAATACTAGAGGATGCAACCACTGTTGTTGTGAAGAGGTTAAAGGAGGTAGCCGTTGGAAAGAAGGATTTTGAGCAACACATGGAGATTGTAGGGAGTCTTAAACATGAGAATGTGGTTGAGCTAAAAGCATATTATTATTCCAAAGATGAGAAACTTATGGTATATGATTACCACAGTCAGGGGAGCATCTCTTCTATGTTGCATGGTAAAAGAGGAGAGGAGAGGGTGGCTTTAGATTGGGATACTCGGCTAAAAATAGCTTTAGGTGCTGCAAGAGGCATTGCTCGTATCCATGTTGAGAATGGTGGTAAGCTTGTACATGGCAACATCAAGTCCTCAAATATCTTTCTCAATACCAAACAATATGGTTGTGTATCTGACCTTGCCCTAGCAACCATATCAAGCTCACTTCCCTTACCCATATCACGAGCTGCTGGTTACCGGGCACCTGAAGTTACAGACACAAGGAAAGCAGCACAACCTTCAGATGTTTACAGCTTTGGTGTGGTGTTACTAGAACTTCTTACAGGGAAATCCCCTATCCACACAACTGGTGGTGATGAGATTATCCATTTAGTAAGATGGGTTCATTCAGTTGTGCGAGAAGAATGGACAGCAGAAGTGTTTGACTTAGAGCTTATGAGATATCCAAATATAGAAGAAGAAATGGTTGAAATGTTACAGATAGCAATGTCATGTGTGGTAAGGATGCCTGATCAGAGACCTAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTTAGGCAGATTGATACAGAGACTCAGCCATCATCTCAACGTGACAATGATAACTCCCCTTCCGCTACATCCCCCTTTCCCAAAGGAAGTGAATGA 2562 0.4196 MTNPMGPPPPKNPNLPKTSMPHPLNPQPSNPTQPPPPPPLQRDSNNSDDSSAQTPKFSSQGVVVPYKIPLWSSAPSHEFYLKVLKDDAIIDKFNVFEKEAYMFGRLDFCDFVLEHPTISRFHIANMKKEIKSIQVKDISQGGLTKGQHTQIARNEQRTTQLLEYHYISEIITSTPKTTHFLSLAYSEGAGYRVFLLRDRADILFGQICGGNSSFPAAAAGSGKLEMEFLHIFLSIYLFGLILWQGNAEPVEDKEVLLDFVNKFPASRSLNWNESTSMCATWTGVTCNEDKSRVIAIRLPGVGFHGTIPPDTISRLSGLQTLSLRSNVITGHFPSDFSNLKNLSFLYLQFNNLSGPLPDFSAWKNLTVVNLSNNHFNGSIPVSLSNLTQLAGLNLANNSLSGEIPDLKLSRLQVLNFSNNDLNGSVPKSLQRFPESAFFGNNISLGNSPAISPVPSPAYEPFSTSKKHGRLSETALLGIIVAGSVLGLVAFVLLIFVCCSRRDEDEDEAFSSGKLRKGGMSPEKAVSRNQDANNKLTFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYHSQGSISSMLHGKRGEERVALDWDTRLKIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLALATISSSLPLPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDTETQPSSQRDNDNSPSATSPFPKGSE* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00482 853 MobiDBLite consensus disorder prediction 43 58 - -
Rops2g00482 853 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 627 835 - -
Rops2g00482 853 Pfam Protein kinase domain 555 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00482 853 MobiDBLite consensus disorder prediction 1 58 - -
Rops2g00482 853 Pfam Leucine rich repeat 306 352 IPR001611 GO:0005515
Rops2g00482 853 FunFam Probable inactive receptor kinase RLK902 249 407 - -
Rops2g00482 853 ProSitePatterns Protein kinases ATP-binding region signature. 558 589 IPR017441 GO:0005524
Rops2g00482 853 Gene3D Ribonuclease Inhibitor 251 359 IPR032675 -
Rops2g00482 853 FunFam pollen receptor-like kinase 1 521 626 - -
Rops2g00482 853 Gene3D Ribonuclease Inhibitor 360 450 IPR032675 -
Rops2g00482 853 MobiDBLite consensus disorder prediction 1 42 - -
Rops2g00482 853 ProSiteProfiles Protein kinase domain profile. 552 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00482 853 Gene3D Transferase(Phosphotransferase) domain 1 628 845 - -
Rops2g00482 853 Pfam Leucine rich repeat N-terminal domain 251 287 IPR013210 -
Rops2g00482 853 SUPERFAMILY L domain-like 263 432 - -
Rops2g00482 853 SUPERFAMILY SMAD/FHA domain 64 140 IPR008984 GO:0005515
Rops2g00482 853 MobiDBLite consensus disorder prediction 825 853 - -
Rops2g00482 853 Gene3D Phosphorylase Kinase; domain 1 519 626 - -
Rops2g00482 853 Gene3D - 46 162 - -
Rops2g00482 853 ProSiteProfiles Forkhead-associated (FHA) domain profile. 101 142 IPR000253 GO:0005515
Rops2g00482 853 PANTHER OS05G0588300 PROTEIN 233 835 - -
Rops2g00482 853 SUPERFAMILY Protein kinase-like (PK-like) 556 820 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00482 Rops-Chr2 6921428 6929554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00482 241 846 Receptor kinase-like Gene Family AT4G23740 65.802 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops2g00482 Pkinase 4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00482 - - gmx:100804799 1053.51