Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00470 ATGGAGAATGACTGGAGCTGGGAGCAGAACACACTCATCAATGAGTTGATTCAGGGGATGGAGGTAGCAAAAAGATTGAAGGAAGACTTGAGTGCACCATATTCTGTTGATGCAAGGGATTTGCAGGTGCAGAGGATATTATCTTCTTATGAAAGGGCTCTACAAATTCTAAGATGGAATGAATCAACTTCCAAGTTGCAGATCATGGGTCGAGCAACAACAACTTTGTTACCAGAGTCTTCAATGTCTGCCAACGGAAGTCCTCTGAGGGAGGATGTTGATAGGGCCATCCAGGATCACCAGGAGGTTAAACATGATTCAAAAAAAAGAAAGATTACGCCCAAATGGATGGATCAAATAAGAGTGAGCTCAGAGAGTGGCCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAGTATGGTCAGAAAGACATACTCGGTGCCAAATATCCTAGAAGTTACTATAGGTGCACCTTCCGCAACACACAAAATTGCTGGGCCACGAAGCAAGTACAGAGATCAGATGAAGATCCCACAATATTTGAAATAACTTACAGAGGAAGGCATACATGTTCTCAGGGAAACAATGCCATTCTGCCACATAAGTCATCAGATAAACAAGAGAAACAACACAGTCATAATAATGATATCCACCATGCACAGCCATCACAAGAAAGCCTCATGAAGTTCAGAAACACCTTGACTGTCAGAACGGATAAACTTGGAAATGAAGAAATGGCAGGTCCTTTTACATTCCCTTCCACTTCATTTGGATGCATGACACAAGAAAACCACGGCTTGATTTCTTCAGTCTCAGAGAATGATTCCTTCTTGAGCAGCCTTTTCCAAACACACTTCATATCTCCAACAACACCAGAATCATACTATTTCTCATCTCCAACTTTCCAGATGAATGAGATTGATGGGGTCTACAACAAGCCCCATTCGGAATCTGATATTACTGAGATCATTTCCACCAACACATCAGCCACCAATTCTCCAATTCCCGATTTCAATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCTTTCAATACTCCAGGCTTTTTCTCCTAG 1086 0.4199 MENDWSWEQNTLINELIQGMEVAKRLKEDLSAPYSVDARDLQVQRILSSYERALQILRWNESTSKLQIMGRATTTLLPESSMSANGSPLREDVDRAIQDHQEVKHDSKKRKITPKWMDQIRVSSESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQNCWATKQVQRSDEDPTIFEITYRGRHTCSQGNNAILPHKSSDKQEKQHSHNNDIHHAQPSQESLMKFRNTLTVRTDKLGNEEMAGPFTFPSTSFGCMTQENHGLISSVSENDSFLSSLFQTHFISPTTPESYYFSSPTFQMNEIDGVYNKPHSESDITEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFFS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00470 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 299 IPR044810 GO:0003700
Rops2g00470 361 FunFam WRKY transcription factor 53 118 195 - -
Rops2g00470 361 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00470 361 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g00470 361 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00470 361 MobiDBLite consensus disorder prediction 193 228 - -
Rops2g00470 361 MobiDBLite consensus disorder prediction 203 219 - -
Rops2g00470 361 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g00470 361 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00470 Rops-Chr2 6724760 6726584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00470 7 353 WRKY Transcription Factor Family AT4G11070 39.943 7.17e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g00470 WRKY 1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00470 - - gmx:100815760 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02249 1 44442874 44444384 Rops2g00470 2 6724760 6726584 PCT