Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00466 ATGGAAGGAATGCAAGAGAGAGAGACAGAGCTTGAACTCCACCATATCAGGTCGTGTTTATCAAATCTCATATTATCAAGTGGCACAAACACCATCGACTCAATTTTCTCTCATTGCCCACCACCAAACCCCACTACTACCATTACCAGCTCTATGTTGGAGCCATCAAGCTCTCTTGGGTCCTCGGTGTACCAACGTCAAAGAGATATCTTGCAAAAGTTCTATCAAGAAAGCCGGTTGATGAAGAAAAAAGCCTACAGGGGAGTGAGACAGAGACACTGGGGAAAATGGGTCGCAGAGATTAGACTCCCTCAGAACAGAATGAGGGTTTGGTTGGGCACTTATGACACTCCTGAAGCTGCTGCTTATGCTTATGATTGTGCAGCTTATAAGCTCCGAGGTGAATATGCACGCTTGAATTTCCCAAGTGTGAAGGACCCGTGTGTTTTACTGGGATTTGGAGATGATTGCATGAGATTGAATGCTTTGAAGAGCTCCGTGGATGCTAAAATTCAAGCCATGTGTCAAAAGGTGAAGAGAGCCAAGTCCAAGAAGCGTGTGGTCAAGAAACTTGAGTCTTGTGCTAACGTGAACAATGGTCAGAGAGAGAAACAACATAAGATAGAGTCATCGCCTTGTTCTTCATCTTCATTGCCACCAATCTTTTGTGATTTTCGGAATAGTGTTTCAGGGGATGGGATTTGGAATTGGGAGTACTCTCCACCCTCTGATTCAACAGAGTGTTCAATAATGGTAACAGAGGAGTCAGATTTCCAAAATTGTTCCTTGGCAAGGATCCCCTCCTTTGATCCTGATTTGATTTGGGAAGTTTTGGCTAATTAG 843 0.4401 MEGMQERETELELHHIRSCLSNLILSSGTNTIDSIFSHCPPPNPTTTITSSMLEPSSSLGSSVYQRQRDILQKFYQESRLMKKKAYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTPEAAAYAYDCAAYKLRGEYARLNFPSVKDPCVLLGFGDDCMRLNALKSSVDAKIQAMCQKVKRAKSKKRVVKKLESCANVNNGQREKQHKIESSPCSSSSLPPIFCDFRNSVSGDGIWNWEYSPPSDSTECSIMVTEESDFQNCSLARIPSFDPDLIWEVLAN* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00466 280 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Rops2g00466 280 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Rops2g00466 280 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Rops2g00466 280 FunFam Ethylene-responsive transcription factor 2 84 143 - -
Rops2g00466 280 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Rops2g00466 280 Gene3D AP2/ERF domain 84 144 IPR036955 GO:0003700|GO:0006355
Rops2g00466 280 CDD AP2 86 142 IPR001471 GO:0003700|GO:0006355
Rops2g00466 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 39 278 - -
Rops2g00466 280 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Rops2g00466 280 SUPERFAMILY DNA-binding domain 85 142 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00466 Rops-Chr2 6659404 6660246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00466 12 280 AP2-EREBP Transcription Factor Family AT1G64380 43.658 9.17e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops2g00466 AP2 7.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00466 - - gmx:100785364 293.508