Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00439 ATGGAGGATGCTGAAACCAAAGGAAGAATCGAGGAAACGGTTCGGAGGATTTTGCAAGAATCAAACATGGACGAGGTTACAGAGTCCAAGCTTCGAAAGCAAGCCTCCAACGAATTGGGTCTCGACCTTTCTCAGCCACACTTCAAAGCCTTTGTGAAACAAGTTGTGCAAGCTTTTCTCCAAGAGAAGCAACAACAAGAAGAAGAACAACAACAACAGGTTGAACAAGAGGGGAAAGACAAGGAGTTCGATGATGATGGCGATCTTGTCATCTGCAAGCTTTCAGAGAAGAGAAAGGTGACTATTCAGGATTTCAGAGGGAAAACATTGGTGTCCATTCGGGAGTATTATAGAAAGGATGGCAAAGAACTACCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGTCAGCCTTTAAGAAAAATGTGCCTGCCATAGAAAATGCCATTAAGAAAATGGAGTCGCGCAACATATAA 480 0.4313 MEDAETKGRIEETVRRILQESNMDEVTESKLRKQASNELGLDLSQPHFKAFVKQVVQAFLQEKQQQEEEQQQQVEQEGKDKEFDDDGDLVICKLSEKRKVTIQDFRGKTLVSIREYYRKDGKELPTSKGISLTEEQWSAFKKNVPAIENAIKKMESRNI* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00439 159 SUPERFAMILY DEK C-terminal domain 5 61 - -
Rops2g00439 159 Gene3D - 2 63 - -
Rops2g00439 159 FunFam RNA polymerase II transcriptional coactivator KELP 81 157 - -
Rops2g00439 159 Pfam DEK C terminal domain 6 60 IPR014876 -
Rops2g00439 159 Gene3D Transcriptional Coactivator Pc4; Chain A 81 157 IPR009044 GO:0003677|GO:0006355
Rops2g00439 159 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 157 IPR045125 GO:0003713|GO:0060261
Rops2g00439 159 PIRSF RNA_polymII_KELP 1 158 IPR017415 -
Rops2g00439 159 Pfam Transcriptional Coactivator p15 (PC4) 92 143 IPR003173 GO:0003677|GO:0006355
Rops2g00439 159 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Rops2g00439 159 Coils Coil 56 80 - -
Rops2g00439 159 SUPERFAMILY ssDNA-binding transcriptional regulator domain 91 153 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00439 Rops-Chr2 6337396 6339484 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Rops2g00439 DEK_C 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00439 K25815 - gmx:100305633 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00439 2 6337396 6339484 Rops2g00439 2 6337396 6339484 ECH