Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g00433 | ATGGAGCTAAGCTTGGATTTGAGTTTGGCCTGTGTCCCCAAAACCGTTTCTTTGTTTCTTGGTGACATTTCTAGAAGCAAAGACATGTCTGAGAAACTGGCCTTGCTTGAGAAATTTGTGCAAATACTGGAGGATGAAATGAGAAAAGTAGAGGCCTTCAAACGCGAACTCCCTCTTTGCATGCTCCTCATAAACGATGCCATTACAAGATTCAAAGAAGAAAAAATCCGGTGTATGGGTATGCAAGATCCACCAGTGACTGAAGAATTGATGCCACTGAAAACCAATTATGGAGGAAATGGAAAAGGACCCTTGACCATGGCAAAGGAAAGTGGTGACAAGAAGAATTGGATGAGTTCAGCTCAGCTATGGACCACTGAAACCAAATTGAGGAATGAAGAAGATGATAAGTCTGTGCCTGATCACCCAATTCAGCAACGGGATCAGAAGAACAATAGTGGAGGAACATTGATCGCATTTAATGGAAATCCGTGTGTACCCAAGCAAGTTTCTTCACCAGTTCCAAGCTTTAGTTTGATGAGTCCTGCATCTGAACTGAGTCATAGCAATTCCAAGAGTGGTTGTGGAGGTAGTAGTTCTGGCTCTTCTTTGCTCCGTGTTGAGATGCAGAGTCAACCACAACATCTGCAGCAGAATCCAAGGAAACAAAGGCGATGCTGGTCACCGAAGCTTCATCGGCGTTTTGTTGACGCGCTTCAACAACTTGGTGGAGCACAAGTGGCAACTCCTAAACAAATTAGAGAACTGATGCAGGGGGAAGTTTTCTATGCACAGATGTTGGAGTTTTCTATGCACCAGGTCATGTTTTAA | 831 | 0.438 | MELSLDLSLACVPKTVSLFLGDISRSKDMSEKLALLEKFVQILEDEMRKVEAFKRELPLCMLLINDAITRFKEEKIRCMGMQDPPVTEELMPLKTNYGGNGKGPLTMAKESGDKKNWMSSAQLWTTETKLRNEEDDKSVPDHPIQQRDQKNNSGGTLIAFNGNPCVPKQVSSPVPSFSLMSPASELSHSNSKSGCGGSSSGSSLLRVEMQSQPQHLQQNPRKQRRCWSPKLHRRFVDALQQLGGAQVATPKQIRELMQGEVFYAQMLEFSMHQVMF* | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g00433 | 276 | Gene3D | - | 221 | 268 | - | - | |
Rops2g00433 | 276 | SUPERFAMILY | Homeodomain-like | 220 | 257 | IPR009057 | - | |
Rops2g00433 | 276 | MobiDBLite | consensus disorder prediction | 129 | 164 | - | - | |
Rops2g00433 | 276 | MobiDBLite | consensus disorder prediction | 96 | 117 | - | - | |
Rops2g00433 | 276 | MobiDBLite | consensus disorder prediction | 145 | 164 | - | - | |
Rops2g00433 | 276 | MobiDBLite | consensus disorder prediction | 176 | 203 | - | - | |
Rops2g00433 | 276 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 8 | 258 | IPR044787 | GO:0003700|GO:0006355 | |
Rops2g00433 | 276 | MobiDBLite | consensus disorder prediction | 129 | 144 | - | - | |
Rops2g00433 | 276 | Coils | Coil | 36 | 56 | - | - | |
Rops2g00433 | 276 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 222 | 260 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g00433 | Rops-Chr2 | 6286844 | 6290617 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g00433 | 1 | 258 | G2-like Transcription Factor Family | AT4G37180 | 39.773 | 5.14e-47 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Rops2g00433 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g00433 | - | - | pvu:PHAVU_002G021400g | 298.13 |