Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00415 ATGGCCACGAAGCACTCAACCCCTCTCGTCTCCTTTCTCGAACGCCTCCAAGAAACCGCTTTCATAACCTTCGGCACGTCCAATTTCGACGCTAAAACTTACGTGGACTTGCCGTTAAAGTTCAGCCTCTCCGTCACGGAGGACGCCTTCCAGAAGCTTCCAAGGGAAGGCAACAACGGTTCCGTGCCGGTGGATGATCTGAAGCGTTTTATAGAAGCTTACTTCGAAGGTGCAGGGAATGATGTGGTGTACCTGGAACCAGAGGATTTCGTCCCTGAGCCAGAGGGTTTCTTGCCCAAAGTGAAGCACCCTCAGATGAGGGCATGGGCACTTCAGGTACATTCGCTTTGGAAGAACTTGAGCAGGAAAGTATCCAGTGCGGTGATGACCCACCCAGAGTTGCATACGCTACTCCCTCTCCCTTCTCCTTTTGTCATTCCTGGTTCACGCTTTCGAGAGGTCTATTACTGGGATTCCTATTGGGTTATTAGGGGCTTGCTGGCGAGTAAAATGTATAAGACTGCTACAGCCGTTGTCACCAATCTCATTTCCTTCATTGAGAAATATGGGTTTGTGCTTAATGGTGCTAGAGCATACTACACTAACAGGAGCCAACCTCCCCTTTTAAGTGCTATGATTTATGAGATATACCGTACCACTGGTGATATAGAATTAGTTAAAAGATCTCTACCCGCACTACTGAAAGAGCATAAGTTTTGGAATTCAGATATACATAAAGCCACCATTTTGGATGCTCAAGGGTGCACTCACACCTTGAATCGTTATCATGCAATGTGGAACAAACCCAGGCCAGAATCATACATAATGGACAAGGCATCTGCTTCCAAGTTCTTAAAAGTTTCAGACAAACAACATTTTTACGTTGAACTGGCGTCAGCTGCTGAATCGGGATGGGATTTCAGCACACGATGGATGAGAGACCCTCCTAATTTCTCAACATTGTCTACAACATCAGTAATACCTGTTGATTTAAATGCATTTCTACTTGGGATGGAACTTAATATTGCCTTCTTTGCAAGAGTCACCGGAGATAATAGCATTGCAGAACACTTCCTGGAAGTTTCTGATGTTAGAAAGAAGGCAATGGACTCTGTTTTCTGGAATGCAAACATGAAACAATGGCTTGATTACTGGCTCAGCAATAGCTCATGTGAGGAGGTTCAAGTTTGGAAAGCCACGCACCAGAATCAAAACGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATACTTCACTTGTGGGTAGTGTTGTTGAAAGTTTCAAAACTTCTGGTCTGCTTCGTGATGCCGGAGTGACAACTTCTTTGAGTAATTCAGGACAGCAGTGGGACTTTCCAAATGGTTGGCCTCCACTTCAACACATGTTAGTTGAAGGTCTGTTAAAGTCAGGATTAGAAGAAGCAAGGTCATTGGCTGAGGAAATTGCCATCAAATGGATCACAACCAATTATATTGTTTACAAGAAAACGGGTGTAATGCATGAAAAGTTTGATGTGGAGCATTGCGGAGAATTTGGAGGTGGGGGTGAATATGTACCTCAGACTGGTTTTGGCTGGTCTAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTCAAGATCGGAATATAGAATGCTGA 1662 0.444 MATKHSTPLVSFLERLQETAFITFGTSNFDAKTYVDLPLKFSLSVTEDAFQKLPREGNNGSVPVDDLKRFIEAYFEGAGNDVVYLEPEDFVPEPEGFLPKVKHPQMRAWALQVHSLWKNLSRKVSSAVMTHPELHTLLPLPSPFVIPGSRFREVYYWDSYWVIRGLLASKMYKTATAVVTNLISFIEKYGFVLNGARAYYTNRSQPPLLSAMIYEIYRTTGDIELVKRSLPALLKEHKFWNSDIHKATILDAQGCTHTLNRYHAMWNKPRPESYIMDKASASKFLKVSDKQHFYVELASAAESGWDFSTRWMRDPPNFSTLSTTSVIPVDLNAFLLGMELNIAFFARVTGDNSIAEHFLEVSDVRKKAMDSVFWNANMKQWLDYWLSNSSCEEVQVWKATHQNQNVFASNFVPLWMKPFYSDTSLVGSVVESFKTSGLLRDAGVTTSLSNSGQQWDFPNGWPPLQHMLVEGLLKSGLEEARSLAEEIAIKWITTNYIVYKKTGVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPQDRNIEC* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00415 553 Gene3D - 22 551 IPR012341 GO:0005975
Rops2g00415 553 PRINTS Glycosyl hydrolase family 37 signature 369 385 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 PRINTS Glycosyl hydrolase family 37 signature 294 311 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 PRINTS Glycosyl hydrolase family 37 signature 527 540 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 PRINTS Glycosyl hydrolase family 37 signature 189 207 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 PRINTS Glycosyl hydrolase family 37 signature 259 276 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 PRINTS Glycosyl hydrolase family 37 signature 326 343 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 PRINTS Glycosyl hydrolase family 37 signature 447 463 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 PANTHER TREHALASE 9 551 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 Pfam Trehalase 28 544 IPR001661 GO:0004555|GO:0005991
Rops2g00415 553 ProSitePatterns Trehalase signature 2. 454 463 IPR018232 GO:0004555|GO:0005991
Rops2g00415 553 SUPERFAMILY Six-hairpin glycosidases 24 546 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00415 Rops-Chr2 6120663 6125590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00415 6 553 Trehalose Biosynthesis Gene Families AT4G24040 58.258 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00415 K01194 - gmx:547539 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00415 2 6120663 6125590 Rops2g00415 2 6120663 6125590 ECH