Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00414 ATGGACGTGAAGCCAACAACCCCTCTCGTTTCCTTTCTCGAACGCCTCCAAGAAACAGCTTTCATCACCTTCGGCACATCCAATTTTGACGTGAAAACCGCCGTCGACTTGCCGTTAAAGTTCAGCCTCTCCGTCACAGAAGACGCGTTCCAGAAGCTTCCAAGGGAAGCCAACGGTTCCGTGCCGGTGGATGATCTGAAGCGTTTTATAGAAGCGTACTTTGAAGGTGCAGGGGATGATGTGGTGTACCAGGAACCAGAGGATTTTGTCCCTGAGCCAGAGGGTTTCTTGCCCAAAGTGAAGCACCCTGAGATGAGGGCATGGGCGCTTCAGGTACATTCCCTTTGGAAGAACTTGAGCAGGAAAGTATCCAGTGCGGTGACGACACACCCAGAGTTGCATACGCTGCTTCCTCTGCCTGCTCCTTTTGTCATTCCTGGTTCACGCTTTCGAGAGGTCTATTACTGGGATTCCTATTGGGTTATTAGGGGCTTGCTGGCGAGTAAAATGTATAAGACTGCTACAGCCGTTGTCACCAATCTCATTTCCTTAATAGAGGAATATGGGTTTGTGCTTAATGGTGCCAGAGCATACTACACTAACAGGAGCCAACCTCCCCTTTTAAGCGCTATGATTTATGAGATATACCAAAGCACTGGTGATATAGAATTAGTTAAAAGATCTCTACCTGCACTACTGGAAGAGTATAAGTTTTGGAATTCAGATATACATAAAGTCACCATTTTGGATGCCCAAGGGTGCACTCACACCTTAAATCGTTATCATGCAATGTGGAACAAACCCAGGCCAGAAGCATCCGTAAAGGACAAGGCATTTGCTTCCAAGTTCTTGAGTGTTTCAGAAAAACAACATTTTTACCTTGAACTGGCGTCAACTGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGAGACCCTCCTAATTTCACAACATTGTCTACAACATCAGTAATACCTGTTGATTTAAATGCATTTCTACTTGGGATGGAACTTAATATTGCCTTCTTTGCGAAAGTCACTGGAGATAATAGCACTGCAGAACACTTCCTGGAAATTTCTGATGTTAGAAAGAAGGCAATGGACTCTGTTTTCTGGAATTCAAACATGAAACAATGGCTTGATTACTGGCTCAGCAATAGCCCATTTGAGGAGGTTCAAGTTTGGGAAGCCAAGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATACTTCACTTGTGGGTAGTGTTGTTGAAAGTCTAAAAAATTCTGGCCTGATTCGTGCTGCGGGAGTTGCAACTTCTTTGAGTGATTCGGGACAACAATGGGACTTTCCAAATGGGTGGGCCCCAGTTCAACACATGTTAGTTGAAGGTCTGTTAAAGTCAGGATTAGAAGAAGCAAGGTCATTGGCTGAGGAAATTGCCATCAGATGGATCACAACCAATTATATTGTGTACAAGAAAACGGGTGCTATGCATGAAAAGTTTGACGTGGAGCATTGTGGAGAATTTGGAGGTGGGGGTTTATATGTACCCCAGACTGGTTTTGGCTGGTCTAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTCAAGACAGGAACATAGAATGCTGA 1659 0.4448 MDVKPTTPLVSFLERLQETAFITFGTSNFDVKTAVDLPLKFSLSVTEDAFQKLPREANGSVPVDDLKRFIEAYFEGAGDDVVYQEPEDFVPEPEGFLPKVKHPEMRAWALQVHSLWKNLSRKVSSAVTTHPELHTLLPLPAPFVIPGSRFREVYYWDSYWVIRGLLASKMYKTATAVVTNLISLIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYQSTGDIELVKRSLPALLEEYKFWNSDIHKVTILDAQGCTHTLNRYHAMWNKPRPEASVKDKAFASKFLSVSEKQHFYLELASTAESGWDFSTRWMRDPPNFTTLSTTSVIPVDLNAFLLGMELNIAFFAKVTGDNSTAEHFLEISDVRKKAMDSVFWNSNMKQWLDYWLSNSPFEEVQVWEAKHQNQNVFASNFVPLWMKPFYSDTSLVGSVVESLKNSGLIRAAGVATSLSDSGQQWDFPNGWAPVQHMLVEGLLKSGLEEARSLAEEIAIRWITTNYIVYKKTGAMHEKFDVEHCGEFGGGGLYVPQTGFGWSNGVVLAFLEEFGWPQDRNIEC* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00414 552 PRINTS Glycosyl hydrolase family 37 signature 188 206 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 PRINTS Glycosyl hydrolase family 37 signature 446 462 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 PRINTS Glycosyl hydrolase family 37 signature 325 342 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 PRINTS Glycosyl hydrolase family 37 signature 293 310 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 PRINTS Glycosyl hydrolase family 37 signature 368 384 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 PRINTS Glycosyl hydrolase family 37 signature 526 539 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 PRINTS Glycosyl hydrolase family 37 signature 258 275 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 ProSitePatterns Trehalase signature 2. 453 462 IPR018232 GO:0004555|GO:0005991
Rops2g00414 552 PANTHER TREHALASE 7 550 IPR001661 GO:0004555|GO:0005991
Rops2g00414 552 SUPERFAMILY Six-hairpin glycosidases 25 545 IPR008928 GO:0005975
Rops2g00414 552 Gene3D - 22 550 IPR012341 GO:0005975
Rops2g00414 552 Pfam Trehalase 29 543 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00414 Rops-Chr2 6098004 6103394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00414 3 552 Trehalose Biosynthesis Gene Families AT4G24040 59.206 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00414 K01194 - gmx:547539 974.926