Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00405 ATGGACCATTTCTACCTCTACCTCTCCCTTCTCCTTCTCTTTGTTACTTTCGTGTCTCTCTTCCTTTTCTACAACCACAGGTCACCCTTCATGGTCCCCAACTTGCCACCGGGAAAGATAGGGTACCCAATAATCGGTGAGAGCCTCGAGTTTTTCTCCACAGGATGGAAAGGGTATCCAGAAAAGTTCATCTTCGACCGCATGATCAAATATTCTTCTGAACTATTCAAAACTTCAATCTTCAGAGAACCAACAGTGATCTTTTGTGGTGCCGCAGGTAACAAGTTTTTGTTTTCTAATGAGAACAAGTTTGTGACTGCATGGTGGCCTATCAGTGTAAACAAGTTGTTCCCTACCACGACTCAAACTAGCTCTAATGAAGAATCAAAAAAGATGAGGAAGTTGCTCCCTCAGTTTCTCAAACCTGAAGCTCTCCAACGTTACGTTGGTATCATGGATACAGTAGCGCAGAGACACTTTGCTTCTTTTTGGGAGAACAAGACGGAAGTCACCGTTTACCCCTTGGCCAAGAGGTATACCTTCTTATTGGCTTGTCGTTTGTTCATGAGTGTTGAGGATGAGAACCAAGTGGCGAAATTCAGGGACCCTTTTCATTTGTTGGCAGCTGGAATCATATCGTTGCCTATTGACTTGCCTGGAACACCCTTTAACAAGGCAATAAAAGCTTCCAACTTCATTAGGAAAGAGTTGTTGAAGATCATAAGGCAGAGGAAGGTGGATTTGGCTCAAGGAAAGGCTTCCCCAACACAAGATATACTGTCTCACATGTTGCTGACGTGCGATGAGAATGGACAGTTTATGACTGAACTTGATATTGCTGATAAGATTCTTGGTCTTTTGATTGGAGGCCATGACACTGCTAGTGCTGCATGCACTTTCATTGTCAAATACCTTGCAGAACTTCCTCACATTTATGATAAAGTCTATCAGGAGCAAATGAAAATTGCAAAAGCGAAATCCCCAGGAGAGTTGTTGAATTGGGATGACCTCAACAAGATGAGATATTCTTGGAACGTAGCTTGTGAAGTAATGAGAGTTGCTCCTCCAGTCCAAGGATCTTTCAGGGAAGCCATCAATGACTTTACATTCAATGGGTTCTCAATTCCAAAGGGATGGAAGTTGTATTGGAGTGCAAATTCAACACATAAGAACCCAGAATACTTTCCAGCACCAGAAAAATTCGATCCAAGTAGATTTGAAGGAAATGGACCAGCTCCTTACACTTTTGTGCCATTTGGTGGAGGACCAAGGATGTGTCCTGGAAAAGAGTATGCTCGATTGGAGATACTAGTTTTCATGCACAATTTAGTGAAGAGATTCAAGTGGGAAAAGTTGATTCCAAATGAGAAGATTGTTGTTGATCCTTTGCCTATGCCTGCAAAGGACCTCCCAATTCGACTTTATCCTCACCAAGCCTGA 1440 0.4264 MDHFYLYLSLLLLFVTFVSLFLFYNHRSPFMVPNLPPGKIGYPIIGESLEFFSTGWKGYPEKFIFDRMIKYSSELFKTSIFREPTVIFCGAAGNKFLFSNENKFVTAWWPISVNKLFPTTTQTSSNEESKKMRKLLPQFLKPEALQRYVGIMDTVAQRHFASFWENKTEVTVYPLAKRYTFLLACRLFMSVEDENQVAKFRDPFHLLAAGIISLPIDLPGTPFNKAIKASNFIRKELLKIIRQRKVDLAQGKASPTQDILSHMLLTCDENGQFMTELDIADKILGLLIGGHDTASAACTFIVKYLAELPHIYDKVYQEQMKIAKAKSPGELLNWDDLNKMRYSWNVACEVMRVAPPVQGSFREAINDFTFNGFSIPKGWKLYWSANSTHKNPEYFPAPEKFDPSRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLIPNEKIVVDPLPMPAKDLPIRLYPHQA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00405 479 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 FunFam Taxadiene 5-alpha hydroxylase 26 477 - -
Rops2g00405 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Rops2g00405 479 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 Pfam Cytochrome P450 36 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 CDD CYP90-like 67 476 - -
Rops2g00405 479 PANTHER CYTOCHROME P450 26 35 464 - -
Rops2g00405 479 Gene3D Cytochrome P450 28 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00405 479 SUPERFAMILY Cytochrome P450 29 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00405 Rops-Chr2 5975565 5980883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00405 26 386 Cytochrome P450 AT5G36110 57.967 2.80e-151 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00405 K20667 - gmx:100801007 856.284