Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00401 ATGGCACTCAGTGGTGGGAATTGTTGGATCATATTCATCATCCTATCATGTGTTGTTGCATCTTCTGGGGCTGCTTCTGATTCAGAATTGCTCCTCAAGGTGAAGGAGAGTCTCCAAAACAATAATGCATTATCCTCATGGAGCACATCAACCTCTCCATGTTCAGGTGATAAAGGCAATTGGTCCGGGGTTCTCTGCTATCAAGGAAAAGTTTGGGGCTTAAAGCTTGAGAATATGGGGCTCAAGGGGGTCATTGATGTGGACTCCCTCAAGGAATTACCATATCTTAGAACCATTAGTTTCATGAATAATGAATTTGAAGGCACGTTGCCAGAAATACAAAAGCTAGTTGGTCTCAAGTCCATTTTTCTTTCAAATAACAAGTTTTCTGGGGAGATACCTGATCAAACTTTTGAGCGCATGCAATGGTTGAAGAAAATCCATTTGTCAAACAACCAGTTTACGGGTCCTATTCCAGGTTCGCTGGCAAATTTGACAAGGCTTATGGAGTTAAGGTTAGAGGGAAACAAATTCAGTGGCCGTATTCCACATTTTCGACAGAGCACATTGAAATCATTTAGTGTAGCTAATAATCAGTTGCATGGGGCAATACCACGCACCCTTAGTAACATGGCAGTTTCTTCCTTTGCAGGTAATGAAGGGTTATGTGGAGCCCCGTTGGGTGCATGTCCTTCCAAGAAGCCCTCAACTGTCTGTATTATTATGCTTGTGGTGGTTGTTTGTGTGGCAGTGATTGTGATTGCAGCAGTAATACTCATCATCTTTCGTCTAAAACGACGATCAACAACTTCAGTGGAGGATCCGGGCCTCAACAACAAAGGACATGTGAGGGAAGTGGGTGATGAAAGTCACAGGTCATCAAGATCAATGAGCTCCACTCACAGCAGAAGAGGAGACCACATGAAACTATGTTTTATCAGGGATGACAGGGAGAGGTTTGATTTGCAAGAGTTGCTAAGAGCCTCAGCTGAGATTTTGGGCAGTGGTTGTTTCAGTTCTTCTTACAAGGCTTCTTTGTCGAATGGCCCAACAATAGTGGTGAAGAGGTTCAAGCAAATGAACAATGTGGGGAAGGAAGAGTTTCAAGAGCACATGAGGAGGATTGGAAGGTTGAATCATTCTAATTTGCTTCCTCTTGTGGCTTACTATTATAGAAAGGAGGAGAAGCTCTTGGTTACCGACTATGTTCAGAATGGCAGCTTGGCTGTTCGCCTTCATGGACACCAAGCTCTTGGGGAACCAAGCCTTGATTGGCCAATCCGGTTGAAGATTGTGAAAGGCATAGCTAAAGGTCTTGAATATCTATACAAGGATATGCCGAGCCTAATTGCACCTCATGGAAATCTTAAATCCTCTAATGTTCTTCTGAATCAATCTTTTGAGCCCCTCCTCACTGACTATGGATTAGTCCCTGTGATAAACCAGGACATGGCTCAGGACATCATGGTTACCTACAAGTCTCCTGAATATTTGCAGCATGGAAGAATTACAAAGAAGACTGACGTATGGTGTCTTGGAATACTAATCATAGAGATTCTAACTGGCAAGTTACCTGCTACCTTTTTGCAACAGGGTAAAGGAAGTGAGGTGAGTTTGGCAAATTGGGTGCATTCAGTTGTCCCAGAACAGTGGACTAGTGCTGTGTTTGATCAAGAAATGGGGGCAACCGAGAACAGTGAGAGAGAGATGGTTAAGCTTTTGGAGATTGCCTTGAGTTGTTGTGAAGGAGATGTGGACAAGAGATGGGATTTGAAAGAAGCAGCAGAGAAAATCCAAGAGGTGAAGGAGAGGGATCATGAAGAGGAAATTAATACTTCTTGTGCTAGTGAAGCAGACATGAAGTCTTGA 1869 0.4334 MALSGGNCWIIFIILSCVVASSGAASDSELLLKVKESLQNNNALSSWSTSTSPCSGDKGNWSGVLCYQGKVWGLKLENMGLKGVIDVDSLKELPYLRTISFMNNEFEGTLPEIQKLVGLKSIFLSNNKFSGEIPDQTFERMQWLKKIHLSNNQFTGPIPGSLANLTRLMELRLEGNKFSGRIPHFRQSTLKSFSVANNQLHGAIPRTLSNMAVSSFAGNEGLCGAPLGACPSKKPSTVCIIMLVVVVCVAVIVIAAVILIIFRLKRRSTTSVEDPGLNNKGHVREVGDESHRSSRSMSSTHSRRGDHMKLCFIRDDRERFDLQELLRASAEILGSGCFSSSYKASLSNGPTIVVKRFKQMNNVGKEEFQEHMRRIGRLNHSNLLPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGHQALGEPSLDWPIRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLNQSFEPLLTDYGLVPVINQDMAQDIMVTYKSPEYLQHGRITKKTDVWCLGILIIEILTGKLPATFLQQGKGSEVSLANWVHSVVPEQWTSAVFDQEMGATENSEREMVKLLEIALSCCEGDVDKRWDLKEAAEKIQEVKERDHEEEINTSCASEADMKS* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00401 622 MobiDBLite consensus disorder prediction 271 303 - -
Rops2g00401 622 Gene3D Ribonuclease Inhibitor 24 186 IPR032675 -
Rops2g00401 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 606 IPR046959 -
Rops2g00401 622 Gene3D Ribonuclease Inhibitor 188 230 IPR032675 -
Rops2g00401 622 FunFam Nuclear pore complex protein NUP107 24 184 - -
Rops2g00401 622 FunFam pollen receptor-like kinase 1 295 402 - -
Rops2g00401 622 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Rops2g00401 622 SUPERFAMILY L domain-like 30 223 - -
Rops2g00401 622 Gene3D Phosphorylase Kinase; domain 1 292 402 - -
Rops2g00401 622 SUPERFAMILY Protein kinase-like (PK-like) 331 599 IPR011009 -
Rops2g00401 622 MobiDBLite consensus disorder prediction 600 622 - -
Rops2g00401 622 ProSiteProfiles Protein kinase domain profile. 327 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00401 622 FunFam Pollen receptor-like kinase 1 403 612 - -
Rops2g00401 622 MobiDBLite consensus disorder prediction 278 303 - -
Rops2g00401 622 Pfam Protein kinase domain 330 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00401 622 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Rops2g00401 622 Coils Coil 591 611 - -
Rops2g00401 622 Gene3D Transferase(Phosphotransferase) domain 1 403 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00401 Rops-Chr2 5898147 5900977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00401 7 622 Receptor kinase-like Gene Family AT5G35390 51.613 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops2g00401 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00401 - - gmx:100804368 920.998