Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00387 ATGGCAGGTGCGATGAAGAAGGTTGATAAGATTCGTCAAATCGTGCGTTTGAAGCAGCTCATGATGCGTTGGAAGCACATGAGTATACGACGCCGTTCCGAACATGAGCCATGTGGGGCCCCTCGACGCCCACCCTCTGGGTTCCTCTTTGTCTATGTGGGACCAGAACGCAACCGTTTTGCCATCCCTGCACGTTTCCTTAACTTTCCCGTCTTCGCTGGTCTCCTCGATGTAACCGAGGAAGAGTTTGGGCTCCGAGGTAACGGCGGTTTGGTTCTGCCTTGTGATGTGGCCTTTTTCAGAGACATAGTTAAGCATCTCCACAAAGATGAACACAAGTACGGGAAACTGTCTTTGCAAGAGTTTGTGAATTTATTTTCTGAGGTGGCTTATTCTTGTAAGGAAAACGTCGTCGTTTTTACTTCTCTGTTGCAGAAAGCAGAGGTTTAG 450 0.4844 MAGAMKKVDKIRQIVRLKQLMMRWKHMSIRRRSEHEPCGAPRRPPSGFLFVYVGPERNRFAIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCDVAFFRDIVKHLHKDEHKYGKLSLQEFVNLFSEVAYSCKENVVVFTSLLQKAEV* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00387 149 Pfam Auxin responsive protein 16 106 IPR003676 GO:0009733
Rops2g00387 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00387 Rops-Chr2 5693484 5694204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00387 7 105 Calmodulin-binding Proteins AT3G43120 33.083 2.83e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00387 K14488 - gmx:100797463 221.476