Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00376 ATGGGCAGAAAGTGCTCACATTGTGGAAACGTAGGCCATAATTCTAGGACCTGCACATCTTTCAGAGGGACTTCTTTTGTTGGACTTCGCCTCTTTGGTGTGCAACTAGACATATCCTCATCTTGTGTTACTACCATCAAGAAAAGCTTTAGCATGGATTCCTTACCTTTACCCTCACCATCTTCTCCATCTTCCTCATTTTCTTCATCAAGAATAACCATTGATGACAAAACCTCTATTGGGTATCTATCAGATGGTCTTATAGGTAGAGTCCAAGAAAGGAAGAAAGGAGTTCCATGGACAGAAGAAGAGCACAGAATATTCCTTGTTGGACTTGAGAAACTGGGAAAAGGTGATTGGAGGGGTATCTCTAAAAACTTTGTGACTACAAGAACCCCAACACAAGTTGCTAGCCATGCTCAGAAGTACTTTCTTCGATTAGCAACTATAAATAAGAAGAAGCGACGTTCAAGTCTCTTTGACTTGGTTAATAACACCAACACCAACACAGAAGGTACTGATTGCAAGCCAGGCGATAATTCAGTTTCAACTCATCAACAAGATAAGTTGTCTAAATGTGAAGTTGAGAATGATGCCACTTTGTCATTGCTAGGGCACTTTCAAAAAGAAACCAAATCAGATAAGAAAGAAACTTGTGATAAATACTCTCAAGTTCAACCAGCTGCAGAACATAAAGCTTCAAATGTTCCTATATGGCTACATCCCCTGATGAAATCTTCAAATGTGGTGGTACCTAGTTCCCCAAATGTAGCAGTGCCTGATCTGGAGCTCACTCTTGCAGCCCCTAAGGTTAAGACTTTGGGACAAAATGAATCATCCCCTGGTCCATTCCGGCTTGGACCAATTAGTGTGACTTAA 879 0.4107 MGRKCSHCGNVGHNSRTCTSFRGTSFVGLRLFGVQLDISSSCVTTIKKSFSMDSLPLPSPSSPSSSFSSSRITIDDKTSIGYLSDGLIGRVQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVNNTNTNTEGTDCKPGDNSVSTHQQDKLSKCEVENDATLSLLGHFQKETKSDKKETCDKYSQVQPAAEHKASNVPIWLHPLMKSSNVVVPSSPNVAVPDLELTLAAPKVKTLGQNESSPGPFRLGPISVT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00376 292 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 146 IPR006447 GO:0003677
Rops2g00376 292 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Rops2g00376 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Rops2g00376 292 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Rops2g00376 292 SUPERFAMILY Homeodomain-like 93 148 IPR009057 -
Rops2g00376 292 MobiDBLite consensus disorder prediction 273 292 - -
Rops2g00376 292 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Rops2g00376 292 PANTHER TRANSCRIPTION FACTOR KUA1 3 245 - -
Rops2g00376 292 CDD SANT 99 144 IPR001005 -
Rops2g00376 292 SMART sant 96 146 IPR001005 -
Rops2g00376 292 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Rops2g00376 292 Gene3D - 98 151 - -
Rops2g00376 292 FunFam transcription factor MYB1R1 98 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00376 Rops-Chr2 5556151 5557672 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops2g00376 Myb_DNA-binding 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00376 - - gmx:778052 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00376 2 5556151 5557672 Rops2g00376 2 5556151 5557672 ECH