Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g00375 | ATGAGGAGCCAAAAGGGTTGTTATGAAGAAGAGATGGGTTCCTCTGAGGTCACCGGGAAAGTGGTGGTGGTTGCAGTGAAAGCTTCCAAAGATATTTCAAGGACTGCTTTGGTTTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTATTGGTTGTCATTCCGGTTCTCTCCTCAAGCAAGAGGGTATGGGGCCTTTCAAGATTTACTACTGATTGTGCCACTAGTCATTGGAGGTCCTATTTAGGAACTGCTTCAGATCAGAAAGAAATCATTGCAAATTCCTGTTCTCAATTAGTGCTTCAACTCCATGATTTTTATGATCCAGAGAAGATAAAGATCAGAGTAAAGATTCTTTCTGGTTCTTTATGTGGAGCAGTGGCTGCTGAAGCCAAAAGAGTCCAGTCAAGCTGGGTTATATTGGACAAAAAATTGAAACATGAAAAGAAGTACTGCATGGAGCAGCTGCATTGCAATATTGTTATTATGAAGCAGTCCCGGGCAAAGATTCTACGCTTGAATTTGAATGGTTCACCAAAGATGGAACTCAAGAGGGATTGTCCATTGTCACTGGAGCCGAATGAATATACAAGAAACTTGAAAGACAACTATGAACATCCAGAAATAATTAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCAGAGCAAGGGTCACCACCATTGACTGCAACTGATATTGGAACATCATCGATGTCAAGCTCAGATCCTGGGACTTCACCATTTTTCCACTCTTATAATTATGAAAGACGAAGGAGAGGTTTTCCCTTTGTTCATGAGGGACTGACAAACTTGGAGGATATTGAATCTGACTCAGAGAGTGAAAAGCTAAGTATATCATCCAAAAGTTCATATTTTCAGCCATGGATTGCAAATGTAATTTGTGTAGATGGTGAGTTCTCAAAACATGAGGACTACATTCAAAGATCTAGTGATAAGGCTTTGGTTTCTACCTATGAAGCTTTGCTTCAGAAGTTCTCAAAGTTGGATCAAGATCCTATCTTGGGAGTTCTTAATTGTAAAATTGATGTGAACCTAAGCAGAAGTGTTAGAGAAGCAATTTCACTAGCCAAAAGTGCAACTGCTGGACCTCCCCCATTGTGCTCCATTTGTCAGCACAAGACACCTGTATTTGGGAATCCTCCAAGGTGGTTTACATTTGCTGAATTGCAACTTGCCACAGGTGGTTTTTCACAAGCAAACTTCTTGGCTGAAGGTGGTTTTGGTTCTGTACACCGTGGTGTCCTACCTGATCGGCAGGTCATTGCTGTGAAGCAGCATAAATTAGCCAGTACTCAAGGAGATAAAGAATTTTGCTCAGAAGTAGAGGTCTTAAGTTGTGCTCAACATCGTAATGTTGTGATGCTAATTGGGTTTTGTGTGGAGGATGGAAGAAGATTGCTGGTTTATGAATACATCTGCAATGGGTCTTTGGATTCTTATCTCTATGGAAGAAAGCAGAATGTGCTGGAATGGTCTGCACGGCAAAAAATTGCAGTTGGAGCAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGCATTGTGCACCGTGATATGCGGCCTAACAATATCCTCCTCACTCATGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGATATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCACCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCATTTGGGATAGTACTATTGGAGCTTGTGACTGGAAGGAAAGCTATTGATATAAATCGGCCCAAGGGCCAGCAATGCCTCAGTGAATGGGCACGCCCCTTGCTTGAAGAACATGCCACTCATAAACTAGTAGATCCGAGCATAAGGAACTGCTATGATGAACAAGAGGTTTATCGCATGCTGCAGTGTTCCTCTTTGTGCATCCAACGGGATCCTCAATTAAGGCCTCGAATGTCTCAGGTGCTCAAGATACTGGAAGGTGACATTCTCATGTGA | 2049 | 0.4251 | MRSQKGCYEEEMGSSEVTGKVVVVAVKASKDISRTALVWALTHVVQPGDCIKLLVVIPVLSSSKRVWGLSRFTTDCATSHWRSYLGTASDQKEIIANSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKQSRAKILRLNLNGSPKMELKRDCPLSLEPNEYTRNLKDNYEHPEIIRGPAVTPASSPEQGSPPLTATDIGTSSMSSSDPGTSPFFHSYNYERRRRGFPFVHEGLTNLEDIESDSESEKLSISSKSSYFQPWIANVICVDGEFSKHEDYIQRSSDKALVSTYEALLQKFSKLDQDPILGVLNCKIDVNLSRSVREAISLAKSATAGPPPLCSICQHKTPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDRQVIAVKQHKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSYLYGRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAIDINRPKGQQCLSEWARPLLEEHATHKLVDPSIRNCYDEQEVYRMLQCSSLCIQRDPQLRPRMSQVLKILEGDILM* | 683 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g00375 | 682 | Gene3D | Transferase(Phosphotransferase) domain 1 | 482 | 680 | - | - | |
Rops2g00375 | 682 | SUPERFAMILY | Protein kinase-like (PK-like) | 385 | 676 | IPR011009 | - | |
Rops2g00375 | 682 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 482 | 682 | - | - | |
Rops2g00375 | 682 | CDD | STKc_IRAK | 412 | 678 | - | - | |
Rops2g00375 | 682 | Pfam | Protein tyrosine and serine/threonine kinase | 410 | 675 | IPR001245 | GO:0004672|GO:0006468 | |
Rops2g00375 | 682 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 527 | 539 | IPR008266 | GO:0004672|GO:0006468 | |
Rops2g00375 | 682 | MobiDBLite | consensus disorder prediction | 214 | 247 | - | - | |
Rops2g00375 | 682 | MobiDBLite | consensus disorder prediction | 221 | 247 | - | - | |
Rops2g00375 | 682 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 378 | 481 | - | - | |
Rops2g00375 | 682 | Gene3D | Phosphorylase Kinase; domain 1 | 378 | 481 | - | - | |
Rops2g00375 | 682 | PANTHER | OS01G0750732 PROTEIN | 265 | 680 | - | - | |
Rops2g00375 | 682 | ProSiteProfiles | Protein kinase domain profile. | 406 | 682 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g00375 | Rops-Chr2 | 5543046 | 5547678 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g00375 | 356 | 672 | Trihelix Transcription Factor Family | AT1G68690 | 48.598 | 1.07e-97 | 313 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-2 | Rops2g00375 | PK_Tyr_Ser-Thr | 1.5e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g00375 | - | - | aprc:113855006 | 1221.84 |