Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00372 ATGTCAGGCGTCTTTTCCAATGGATGGAAATCGTTTGTTTCTACCTTTAATCTTGAAGATTCTAAAAAGTACAATAGATCTAACAATCATCAGAACTTGTCTTCCTCATTTGACCATTCATGTCTAAATCTGAAAATTAAACATGTTGTGGTGGAGACTGATGGAGGTAAAATATGGAAGCTGGGCCTATACAGCATAAAGTCAAGGCCAAGGGAGGCAAGGTTGACTTCGGGGTGGAAGACTTTCTGTTCAGACCTTCATCTGAAGCCAGGGGACAAGGTTGTCTTCAAGTTAAAAGATCGAAAAGATAATCGTCTGCTTGCCGATGTTGATCGCTTCTGA 342 0.4064 MSGVFSNGWKSFVSTFNLEDSKKYNRSNNHQNLSSSFDHSCLNLKIKHVVVETDGGKIWKLGLYSIKSRPREARLTSGWKTFCSDLHLKPGDKVVFKLKDRKDNRLLADVDRF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00372 113 ProSiteProfiles B3 DNA-binding domain profile. 16 113 IPR003340 GO:0003677
Rops2g00372 113 CDD B3_DNA 33 102 IPR003340 GO:0003677
Rops2g00372 113 SMART B3_2 16 111 IPR003340 GO:0003677
Rops2g00372 113 SUPERFAMILY DNA-binding pseudobarrel domain 29 106 IPR015300 -
Rops2g00372 113 Pfam B3 DNA binding domain 27 107 IPR003340 GO:0003677
Rops2g00372 113 Gene3D - 20 113 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00372 Rops-Chr2 5509390 5510345 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops2g00372 B3 3.2e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00372 - K09287 mesc:110629300 47.7506