Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00367 ATGGAAGACTTACCAAAGCCTAAAATGTCCCCTAATCCAGTAATACTGCAGAGTGAGAGCTTGACCAAGTATATTCTGGAGACCAGCGTTTACCCAAGAGAACCAGAGACTCTCAAAGAGCTTAGGAATGCCACTGCAAGCCACCCTATGGGCTTCATGGGCGCATCACCTGATGCTTGTCAGCTATTGGCCATACTGTTGACGCTGCTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTTAACATTCCTCATGATGGAAAGATTATAGCTCTGGATCCAGACAGAAAAGCTTATGAGATAGGGCTTCCATTCATCAAAAAGGCTGGTGTAGAACACAAGATTGACTTCATAGAGGCTCAAGCTTTACCAGTTCTTGATAAACTCTTAGCAGATCCTTCAAATGAGGGAACTTTTGACTTTGCCTTTGTTGATGCTGATAAGCATAATTATTGGAATTACCACGAGAGGCTTCTTAAACTGGTGAAGATTGGTGGGTTAATTATCTATGATAACACCCTCTGGGGTGGATCTGTTGCATGGCCTGAAGAGGATGTTCCAGTGCCCAAAAGAAATATCAGGCAGGCTGCACTGGCTTTCAACAAAGCAATTGCAAAAGATTCTCGCGTTGAAATTTCTGTGGCTTCAGTAGGTGATGGATTCACTATCTGCAGGCGTGCTTACTGA 717 0.4351 MEDLPKPKMSPNPVILQSESLTKYILETSVYPREPETLKELRNATASHPMGFMGASPDACQLLAILLTLLNAKKTIEVGVFTGYSLLLTALNIPHDGKIIALDPDRKAYEIGLPFIKKAGVEHKIDFIEAQALPVLDKLLADPSNEGTFDFAFVDADKHNYWNYHERLLKLVKIGGLIIYDNTLWGGSVAWPEEDVPVPKRNIRQAALAFNKAIAKDSRVEISVASVGDGFTICRRAY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00367 238 Pfam O-methyltransferase 27 236 IPR002935 GO:0008171
Rops2g00367 238 CDD AdoMet_MTases 76 180 - -
Rops2g00367 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Rops2g00367 238 PANTHER O-METHYLTRANSFERASE-RELATED 11 237 - -
Rops2g00367 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
Rops2g00367 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00367 Rops-Chr2 5450998 5452193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00367 15 238 Monolignol Biosynthesis Gene Families AT4G26220 66.071 3.77e-112 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00367 K00588 - gmx:100792717 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00367 2 5450998 5452193 Rops2g00367 2 5450998 5452193 ECH