Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00346 ATGACATAGCTCTCTGAGCCCCAAATTCTCCGTTTTCTCTTCTCCCATCGATTCCATTTCTTGCTATTTTTCGTCTTCCTTGATTCCAAAGTCATCAATAAGGATCGCGATTGTGGTGTTAGGGTTTCTTTTCGTTTGTTTAATTTGTTGTGTGCGATGAAGATCGAGGAATTGGAGGATGCAGAGGGTAATAGGGATGAAGAAGAGAATTACGAGAGGCAAATTGTGAGGGTTGATGCTAAGAGAGCGTTGGTGGGAGCAGGTGCACGGATCCTGTTTTATCCTACACTTTTGTATAATGTGCTTCGTAACAAGATTGAAACTGAGTTCAGGTGGTGGGATCAAATTGACGAGTTTTTATTACTAGGCGCAGTTCCATTCCCCAAGGATGTTCCTCACTTGAAGAACCTTGGTGTCGGCGGTGTAATTACTCTGAATGAACCTTATGAAACTTTGGTGCCATCATCATTGTATCATGCTCATGGAATTGATCATTTGGTAATTCCAACAAGAGATTATCTATTTGCCCCCTCATTTGGGGATATCAGCCGAGCCGTGCAGTTCATTCATCAGAATGCAACTTGCGGTAAAACCACTTATGTTCACTGTAAAGCTGGGCGGGGGAGGAGTACTACAATTGTGCTTTGTTATCTGGTCGAATACAAGCACATGACTCCTGCTGTTGCCCTGGATTATGTGCGGTCTCGAAGACCTAGAGTGCTACTAGCACCTTCACAATGGAAGGCTGTTCAAAACTACAACAAACGAAGACCTCGTCCTTTAGCATACTCTCCATCTGGGGATGAAGTTCTTATAACTAAAGCTGATCTCGAAGGCTATCACAGCACTAATGATGCTAGTTTGGAGCTGGCCATTGTTTCTAAAGTGCCAAAGACTAAGCCCATGATAGCAAGACTATCTTGCCTGTTTGCATCCTTAAAAGTATCCGGTAGTAGTATACCAATGGCCAGGCGGCTGCCGGTTTCTGAGTCACGTGCTTGCTAG 1005 0.4408 MT*LSEPQILRFLFSHRFHFLLFFVFLDSKVINKDRDCGVRVSFRLFNLLCAMKIEELEDAEGNRDEEENYERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDQIDEFLLLGAVPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFGDISRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAVALDYVRSRRPRVLLAPSQWKAVQNYNKRRPRPLAYSPSGDEVLITKADLEGYHSTNDASLELAIVSKVPKTKPMIARLSCLFASLKVSGSSIPMARRLPVSESRAC* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00346 333 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 52 311 - -
Rops2g00346 333 Gene3D Protein tyrosine phosphatase superfamily 111 257 IPR029021 -
Rops2g00346 333 CDD PTPMT1 111 255 IPR044596 GO:0004721
Rops2g00346 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 200 210 IPR016130 GO:0016311|GO:0016791
Rops2g00346 333 Pfam Dual specificity phosphatase, catalytic domain 134 254 IPR000340 GO:0008138|GO:0016311
Rops2g00346 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 104 254 IPR029021 -
Rops2g00346 333 SMART dsp_5 114 255 IPR020422 GO:0006470|GO:0008138
Rops2g00346 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 111 258 IPR020422 GO:0006470|GO:0008138
Rops2g00346 333 FunFam Dual specificity phosphatase domain protein 111 258 - -
Rops2g00346 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 179 247 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00346 Rops-Chr2 5137418 5141137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00346 52 322 Protein tyrosine phosphatase (PTP) family AT2G35680 49.695 3.11e-100 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00346 - - gmx:100817410 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00346 2 5137418 5141137 Rops2g00346 2 5137418 5141137 ECH