Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00338 ATGGGGAGAGCCACTAGGTGGTTGAAGAGCTTATTTGGAATAAGGAAGGAAAAAGAGCGCAAAGAAAATTCAAATTCAGGCACAAAATTTTGTCCTCCAGGGAGAGATTCCAGAGGGTTATGCCATAATCCAGCTACCATACCACCTAACATTTCACCTGCAGAGGCTGCTTGGTTACAATCCTTCTACTCAGAAACTGAGAAGGAGCAAAACAAGCACGCCATTGCAGTGGCTGCTGCCACAGCAGCTGCAGCAGATGCTGCCGTGGCTGCTGCTCAGGCTGCTGTGGCAGTGGTTAGGCTAACCAGCCATGGAAGAGACACCATGTTTGGTGGTGGACATCAGAGGTTGGCAGCAGTCAAGATTCAAACTGTATTTAGAGGATACTTGGCAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTCAAGTTACAAGCACTTGTAAGAGGGTACTTAGTGAGGAAGCAAGCAACAGCAACACTGCATAGTATGCAGGCTCTTATTAGAGCTCAAGCAACAGTAAGGTCTCAGAAATCTCGTGGACTCATGAGCACAAAGAATGAAGCAAGCAGGTTTCAACCACAAGCACGAAGATCCATGGAGAGGTTTGATGACAATAGAAGTGAGTACACAGCTCACATTCACAGCAGAAGGCTATCATCTTCTTTTGATGCCACGGTGAATAACACCAACAACAGTGTTGACGGAAGCCCAAAAATAGTGGAAATGGACACTGGCAGGCCAAAATCAAGGTCTCGAAGGAGCAACACTTCAATGTCAGATTTTGGTGATGACCCTTCATTTCAGGCACTCCCCTCACCCCTCTCAATCCCATTTCGCACCCCAGCTCATTTATCCACGCCAGATCACAGGAATTTCCATGACTCAGAATGGGGTCTAACAGGGGAAGAATGCAGGTTCTCTACAGCACAAAGCACTCCACGCTTCACCAATTCTTGTAGTTGTGGTTCTGTTGCCCCTGCCACACCTAAAACCATTTGCACTGATAACTTTTTCCTTGCACAATATGGCAATTTTCCAAATTACATGGCCAACACTCAGTCTTTCAAGGCCAAATTGAGGTCTCATAGTGCTCCTAAACAACGCCCAGAACCAGGTCCAAAGAAGAGGCTTTCCCTCACTGAGATGATGGAATCTAGGAATAGTTTGAGTGGGGTTAGAATGCAGAGGTCTTGCTCACAGATTCAGGAAGCTATTAATTTTAAGAATGCTGTGATGTGTAAGCTTGAGAAGTCCACAGAATTTGGCAGGGAGACAGAGAGAAGCTTCTCCAACCAGAGGAGGTGGTGA 1311 0.4638 MGRATRWLKSLFGIRKEKERKENSNSGTKFCPPGRDSRGLCHNPATIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTMFGGGHQRLAAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSQKSRGLMSTKNEASRFQPQARRSMERFDDNRSEYTAHIHSRRLSSSFDATVNNTNNSVDGSPKIVEMDTGRPKSRSRRSNTSMSDFGDDPSFQALPSPLSIPFRTPAHLSTPDHRNFHDSEWGLTGEECRFSTAQSTPRFTNSCSCGSVAPATPKTICTDNFFLAQYGNFPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLTEMMESRNSLSGVRMQRSCSQIQEAINFKNAVMCKLEKSTEFGRETERSFSNQRRW* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00338 436 Pfam IQ calmodulin-binding motif 142 156 IPR000048 GO:0005515
Rops2g00338 436 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Rops2g00338 436 SMART iq_5 114 136 IPR000048 GO:0005515
Rops2g00338 436 SMART iq_5 137 158 IPR000048 GO:0005515
Rops2g00338 436 Gene3D - 112 167 - -
Rops2g00338 436 MobiDBLite consensus disorder prediction 224 238 - -
Rops2g00338 436 MobiDBLite consensus disorder prediction 178 194 - -
Rops2g00338 436 PANTHER IQ-DOMAIN 5-RELATED 1 382 - -
Rops2g00338 436 MobiDBLite consensus disorder prediction 18 37 - -
Rops2g00338 436 Pfam Protein of unknown function (DUF4005) 313 392 IPR025064 -
Rops2g00338 436 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Rops2g00338 436 MobiDBLite consensus disorder prediction 224 267 - -
Rops2g00338 436 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Rops2g00338 436 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00338 Rops-Chr2 5021031 5023731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00338 1 395 IQD Protein Family AT3G16490 53.731 5.43e-105 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00338 - - aprc:113866809 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00338 2 5021031 5023731 Rops2g00338 2 5021031 5023731 ECH