Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00328 ATGGAAGAACCTTTGGAGGATGGCCAACTCGAACGAGTCGACTCCGAGTTGACATCCACCACCACTGGTACGGACATTTCCTCCATACTCAGCTCCGACGATTTCCGAAGCTCCGGCGACATTTCATCTATTAGCAGCGGTTCCGGCGAGATTCCGACCGTCGCGGTTGACCTAGAGCCTCCGTTGCTTCACCTCGCAGCGTTTAATGAAGAGGAAGGCAAACACTCCTCGCCGGCGGAGGCTGTGGTGACGGTTGTGAGAGAGAAGTGCGTCGGAAGGAATAACAAGGGAGTGAGTTGGGGACACACTTCGGTGATTGGGAGACGGAAAGAGATGGAAGACGCCGTCGCCGTTATTCCGGGATTCATGTCTCGCACGTGCGATCACATCGGCGGTTGTACGGCTCCCGGTTCTAGATCCTCCGGCGAGATCGCTCCCATTCATTTCTTCGGTGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCCAAACGGATGCACGCTGTTATAGCAGAGGAATGGGACCGAGAAATGGCAGGTGGCGCTGAATGGCGTAGAAGGTGGGAAGCTGTATTTGCTAATGGCTTCGAGAGGACTGATAGTGAAATCCTATCAGATGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCTGTGGTGGTTATATCTGGTTGCCAAATTATTACATCGAACTGCGGTGACTCAAGGGTAGTTCTTTGCCGCAAGACTCAAACAATCCCCTTGACAGTGGATCAGAAGCCTGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGTGGAAAAGTCATAAACTGGAATGGAGCCAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATTCCGGTGCCGGAGATAACTTTTACAGCAAGAACAGACGAGGATGAATGCTTAATTTTGGCAAGTGATGGACTTTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCACGCCACATTCTAAGAAGGCGTCGCAGATCCTTGTCAATGGAGGAAATATCTCCCGCACAAGTTGTTGCTGATAGCCTGACTGAAATTGCATATGGTAGAAATAGCAAAGATAACATTTCAGTCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCTGCAAAGGCCTCCTTAA 1188 0.4966 MEEPLEDGQLERVDSELTSTTTGTDISSILSSDDFRSSGDISSISSGSGEIPTVAVDLEPPLLHLAAFNEEEGKHSSPAEAVVTVVREKCVGRNNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHIGGCTAPGSRSSGEIAPIHFFGVYDGHGGSQVAKFCAKRMHAVIAEEWDREMAGGAEWRRRWEAVFANGFERTDSEILSDAVAPEMVGSTASVVVISGCQIITSNCGDSRVVLCRKTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNEEVGEVARHILRRRRRSLSMEEISPAQVVADSLTEIAYGRNSKDNISVIVVDLKSKRKRLQRPP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00328 395 MobiDBLite consensus disorder prediction 14 31 - -
Rops2g00328 395 MobiDBLite consensus disorder prediction 1 31 - -
Rops2g00328 395 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Rops2g00328 395 Pfam Protein phosphatase 2C 107 377 IPR001932 -
Rops2g00328 395 CDD PP2Cc 101 384 IPR001932 -
Rops2g00328 395 SMART PP2C_4 88 382 IPR001932 -
Rops2g00328 395 PANTHER PROTEIN PHOSPHATASE 80 384 IPR015655 GO:0004722|GO:0006470
Rops2g00328 395 ProSiteProfiles PPM-type phosphatase domain profile. 99 384 IPR001932 -
Rops2g00328 395 FunFam Protein phosphatase 2C 51 92 392 - -
Rops2g00328 395 SUPERFAMILY PP2C-like 92 385 IPR036457 -
Rops2g00328 395 Gene3D - 88 393 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00328 Rops-Chr2 4920792 4936613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00328 100 394 PP2C-type Phosphatase Gene Family AT4G26080 51.429 9.18e-101 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00328 K14497 - gmx:100793293 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00328 2 4920792 4936613 Rops2g00328 2 4920792 4936613 ECH