Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00326 ATGGAGAACATTCTTAAGCCCTTGAGAGATGGGGAGTCAGTACTGGACCTCAGTCCAAGATCCATCGTCAGCGGCGGTGTTGAGGATATCTACGGTGAGGATCGTGCCACCGAGGACCAGCTTGTTACCCCATGGACTTTCTCAGTTGCCAGTGGTTACTCTTTGCTAAGGGATCCTCAGTATAATAAAGGGCTTGCTTTTACTGAGAAAGAGAGGGATGCACACTATTTGCGGGGTCTTCTACCTCCCACAGTTAGCACCCAGCAACTTCAGGTGAAGAAACTGATGACCAACATCCGACAATATCAGGTTCCCTTGCAAAAGTACATGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTCTACAAACTTCTCGTTGATAATGTTGAGGAATTGCTCCCAATTGTATACACTCCTACTGTTGGTGAGGCTTGCCAGAAATATGGGAGCATATTCAAGCGTCCTCAGGGTCTTTACATTAGTTTGAAAGAGAAGGGCAAAATCCTTGAGGTTCTAAAAAACTGGCCTGAGAGGAGTATTCAAGTTATTGTTGTCACTGATGGTGAGCGGATTCTTGGACTTGGGGATCTTGGATGCCAGGGGATGGGAATTCCTGTTGGTAAATTGGCTTTGTACACGGCACTAGGAGGACTTCGTCCTTCAGCATGTTTACCTATTACTATTGATGTGGGGACAAATAATCAGCAATTACTGAATGATGAGTTTTACATTGGGCTTAGACAAAAGAGGGCAACTGGGCAGGAATATTATGAACTTCTTCATGAGTTCATGACTGCTGTGAAGCAAAACTATGGAGAAAAAGTTCTGGTGCAGTTTGAAGATTTTGCAAATCATAATGCTTTTGAGTTGCTTGCTAAATATGGCACAACTCATCTTGTTTTCAATGATGACATACAGGGGACTGCATCTGTTGTTCTAGCTGGAGTTGTAGCAGCCCTGAAGCTCATTGGTGGTACCCTGACTGACCACACATTCCTCTTCCTTGGTGCTGGAGAAGCAGGGACTGGTATAGCAGAGCTAATAGCTCTTGAGATGTCGAAGCAGACTAAGGCACCTATAGAAGAGAGCCGCAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCGCGGATGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTTAGCCATCTCATAGATGCTGTTAAGGTAATCAAGCCTACAGTTTTAATTGGATCATCAGGAGTGGGAAAAACATTTACTAAGCAAGTAATTGAGGCTATGACTTCAAACAATGAGAAACCTCTCATTATGGCTCTCTCCAATCCAACCTCACAATCTGAGTGTACAGCTGAAGAAGCTTTCCGGTGGAGTGAGGGTCGTGCAATTTTTGCTAGTGGAAGTCCATTTGATCCTGTTGAACACGACGGCATGGTTTATTTTACAGGCCAGGCCAACAATGCTTACATTTTCCCAGGCTTTGGTTTGGGTTTAGTAATCTCAGGCACAATCCGAGTACATGATGATATGCTTCTAGCAGCCTCGGAAGCCTTGGCCAAACAAGTGACAGAGGAGAACTACAAAAAGGGCTTGATTTACCCACCATTCTCTGATATCAGAAAAATTTCAGCTAATATAGCTGCAAATGTTGCTGCCAAGGCATATGAACTAGGCTTGGCAACACATCTTCCTCGTCCTCAGAATCTTGTGAAGTATGCTGAAAGTTGCATGTATACCCCTGTATACCGCAACTATAGGTGA 1776 0.4426 MENILKPLRDGESVLDLSPRSIVSGGVEDIYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTVSTQQLQVKKLMTNIRQYQVPLQKYMAMMDLQERNERLFYKLLVDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGLRPSACLPITIDVGTNNQQLLNDEFYIGLRQKRATGQEYYELLHEFMTAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLTDHTFLFLGAGEAGTGIAELIALEMSKQTKAPIEESRKKIWLVDSKGLIVSSRMNSLQHFKKPWAHEHEPVSHLIDAVKVIKPTVLIGSSGVGKTFTKQVIEAMTSNNEKPLIMALSNPTSQSECTAEEAFRWSEGRAIFASGSPFDPVEHDGMVYFTGQANNAYIFPGFGLGLVISGTIRVHDDMLLAASEALAKQVTEENYKKGLIYPPFSDIRKISANIAANVAAKAYELGLATHLPRPQNLVKYAESCMYTPVYRNYR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00326 591 PIRSF ME 26 591 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 28 306 IPR046346 -
Rops2g00326 591 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 PRINTS Malic enzyme signature 437 453 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Rops2g00326 591 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 590 IPR036291 -
Rops2g00326 591 FunFam Malic enzyme 50 304 - -
Rops2g00326 591 Gene3D - 50 304 IPR037062 GO:0004471
Rops2g00326 591 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
Rops2g00326 591 Gene3D - 305 591 - -
Rops2g00326 591 PANTHER MALIC ENZYME-RELATED 21 590 - -
Rops2g00326 591 CDD NAD_bind_1_malic_enz 307 585 - -
Rops2g00326 591 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Rops2g00326 591 SMART malic_2 116 297 IPR012301 GO:0004471
Rops2g00326 591 Pfam Malic enzyme, NAD binding domain 307 559 IPR012302 GO:0051287
Rops2g00326 591 FunFam Malic enzyme 305 591 - -
Rops2g00326 591 SMART Malic_M_2 307 560 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00326 Rops-Chr2 4901488 4906262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00326 K00029 - gmx:100782096 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00326 2 4901488 4906262 Rops4g02108 4 47511521 47516886 ECH
Rops2g00326 2 4901488 4906262 Rops7g00272 7 3508918 3514630 ECH
Rops2g00326 2 4901488 4906262 Rops10g01603 10 29586920 29592143 ECH
Rops2g00326 2 4901488 4906262 Rops2g00326 2 4901488 4906262 ECH
Rops2g00326 2 4901488 4906262 Rops5g00107 5 1848165 1853239 PCT