Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00286 ATGGGGGAAAGTGAGGGAGGTGATTGCCCTCCTAAGAATGTATCGTCGGAAGCAGTTGCAACTGCGGTGCCGCCGCCGCCATCGAAGAAGCTTGCCAGGCAGCTCGATTTCACCGGCTTTGGTGGGATTCCGGCAGGTTCGCCTTTGCAGACACAGACACTTCCACCGCCTCCGCCGCCGCCTCCGCCACCTGTTCCTTCTGTCAGGGTTGGGAAACCAGAATCTCCAAAATCAAGACCAAGACCCAACTTTGAAATGAAAGATGGTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACATTCAAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCAGGAATATATTGTGATGGTTGTAACTGTGTAAATTGTTACAATAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAACGAAATCCTAATGCATTTAGGCCAAAAATTGCGAGCAGCCCTCATGGAACACGTGATAACAGGGAGGAGGCTGGAGAAATTTTAATATTGGGAAAGCACAACAAGGGGTGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTCGAGGGAAGTGAAGAGAGACAGGCTTTATTCCATGGAGAACAAAATAACAACATGGCATATATTCAACAGGCAGCCAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGTTATTCATCACCACCAGTATCGAGAAAAAGAAAAGGTTCAGAACTCTTCTTTGGGCAGACTGTGAAGGATCCATCTGTTGGCAAACTGGGACAACAGGCAAACCATGTCAGAGGTCCTGCACCCTCCTCTTCCTTGTCTCCTACCCCAGGTGCTCGTGTTGGACCTGCAACATTAGGTCCTTCAAAGTTTATGTACAGGTCTCTTTTAGCGGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCAGTTCTGGTACTATTATCTGGGCAAGCTGCTAAGACCCTTACAGACCAGAAAAATTTAATGGATAAGCACACAGAAGATCAGACGGAAACCTCTCTTGCTTCTTCAACTCAAGAGCAGTTACCAACCCAAAAGGAACCTGATGTTGAGAAGGCTATGGCCGATGATTGTTCGAGTGCAAACCAAACAGACAAAATCAGCCCTGATAATTCCAGTTCAGATGGTGCTGATGTCCCTAAAGGGAGACCAATGTCTCCTGGAACTTTAGCATTGATGTGTGACGAACAAGATACAATGTTCATGACTGCTGCCTCCCCTATTGGGTCAATGACGCATGCTTGCAACACATCTTTGCAATCACCTTATGGACGAGGAATGACAGAGGTCTATGCAGAGCAAGAAAGGATTGTATTGACGAAATTTAGAGATTTTCTTAATAGGGTTATCACTATGGGAGAAATAAATGAAACGAAGTGTTCTTCAATAGCCAGAAGTGAATTAGAGAGTCAAAAGGACCCAATCATCAATGGCACTGGAATTTCCAGTACTGAGGCAGCGCATCAGCAGGGAGCCACTAGTAATGGTGTTGTTGCTAAAGCTGTTGGCAACACCATTACTTCAACATCTTCAGTCCCTAGTAATCTTGTTCCTGAAAATGGGGAGACTAAGCTGAAGGTGGAAAAATAG 1689 0.4446 MGESEGGDCPPKNVSSEAVATAVPPPPSKKLARQLDFTGFGGIPAGSPLQTQTLPPPPPPPPPPVPSVRVGKPESPKSRPRPNFEMKDGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDNREEAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGEQNNNMAYIQQAANAAITGAIGSSGYSSPPVSRKRKGSELFFGQTVKDPSVGKLGQQANHVRGPAPSSSLSPTPGARVGPATLGPSKFMYRSLLADIIQPQHLKELCSVLVLLSGQAAKTLTDQKNLMDKHTEDQTETSLASSTQEQLPTQKEPDVEKAMADDCSSANQTDKISPDNSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPIGSMTHACNTSLQSPYGRGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSIARSELESQKDPIINGTGISSTEAAHQQGATSNGVVAKAVGNTITSTSSVPSNLVPENGETKLKVEK* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00286 562 MobiDBLite consensus disorder prediction 390 408 - -
Rops2g00286 562 MobiDBLite consensus disorder prediction 276 306 - -
Rops2g00286 562 MobiDBLite consensus disorder prediction 1 96 - -
Rops2g00286 562 MobiDBLite consensus disorder prediction 74 95 - -
Rops2g00286 562 PANTHER TESMIN/TSO1-RELATED 49 488 IPR028307 -
Rops2g00286 562 MobiDBLite consensus disorder prediction 351 423 - -
Rops2g00286 562 Coils Coil 127 147 - -
Rops2g00286 562 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 94 129 IPR005172 -
Rops2g00286 562 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 180 214 IPR005172 -
Rops2g00286 562 MobiDBLite consensus disorder prediction 288 302 - -
Rops2g00286 562 SMART CXC_2 177 218 IPR033467 -
Rops2g00286 562 SMART CXC_2 92 132 IPR033467 -
Rops2g00286 562 MobiDBLite consensus disorder prediction 541 562 - -
Rops2g00286 562 ProSiteProfiles CRC domain profile. 93 217 IPR005172 -
Rops2g00286 562 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00286 Rops-Chr2 4472282 4479055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00286 1 511 CPP Transcription Factor Family AT4G29000 55.692 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Rops2g00286 TCR 3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00286 - - gmx:100786353 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00286 2 4472282 4479055 Rops2g00286 2 4472282 4479055 ECH