Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00283 ATGTATAGATCATTTGTGACCTGTGATGATCCAAAAGGAGTTGTGGAATGTCGGACATTCAGGATACACAGGACTTGTTCTCGTAAAATGAAGGATAAGATCAAAATCAAGAAGACAAATTTTGAGACAAACTTGATGAACAAAAGATACAAAGAAGGTGAGGTTACAAAAGGATCCGATGAAAATTTCATTGGTCCATCATCTTTGCACCTCATACAGGTCTCCAGAGGGGATCAAAGTTTGAAAAACATGATTGATTCATGGTCTAGTGATCTCATGTATGATGGAAGGTCTGAAGATGCTGCAAAAGATTTGTTTAAAGGAGGTCTTGATATGCAAGATTCTCTAATCATGATACGCAAGTTGGAAGAGGCTTCAAAACTGGAGCCTTGTTTTAAGAGAAAACAGACTGAGAAACCTAAAAGAGACAAGATTGAAGCAAAGATGAGTGGTAGAATGCAAGCTAATCAATTTATTGAACAAAGTAATCCAAAGGGATTTCAAAGACCTCAGTCTTCTGCCGATGGTTCTTCAAGTAATTGCACAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTAGGCAAAAATATTTGTTTCCAAGCACAAATTCTGAAGGATTGAAATCAGCATCAGAAACTCCTTCTACAAGCCCATGCCAATCTTCTGGGGTCAGGACTGAAGGGCTCGCTGATCCTTCTTTCTCACAAACAGCTTCAAAGACGGAAAGAGGGCACAATCTAGTTGCCAAGCTGATGGGTTTAGAAGAAGCCCCCTCAAGATCATTTTCAGCTGCCATGCAGAAACATTGGAATGGTGAAAAGATTATGAATCAGAAGAGACCTGTATTTGAGATAGATATGCCTGAGGAAAGAAAGAATAATTCTAAAGCTGAGAAGGTTAATCCAGAACAAAAGACCCCTGTGCATTTCAAAGGACTTATGAATAGGAATTTTGTCAAAGAGCCAAAGCTTCAGGTCCATCATTTCAATGATTCCAATTCCAAGCAGTTTGATGATTTGTCTCACATTTTGCTTATGAAACCTCAATCTACTCCATACCGTGAATCAGTAAAAACCCGTAAGCCAGTTCCTCCAGAAGAGTTATCCATGAGAAAACTGAAAGCAGAAGCAGTATCTTCCAAAATTATCCCACAAAGAAAAGGTTCCAGTTCTACTAACATGGGAAAAGAAATGGAAAAAGATGTAAGCAAACGGCTTACCAAAGAGAAAGGACCTGAATTTCTCAAAGAGGTTGTGAAACTGGATGCAAAAGGAACCAATCTTACTGCAAAATCTTCAGGTAAGGTAAAACTCTATTGTCATGTTAGTCGCACGTCACAGGTGAATGAGACAATTGATAAAAAATGTAAGGCACGGACCATTAGCAGAAAACTGCCAGAAAAGGATATCTCGGAACCTATCATTGTAGCAAGACCTCAAGATCAACAAGAAATCACCTCCACAAAATTGAGGAAGCCACAAAGTGGGTCCAGAATCGACAAGAATGAGATTTCCTGCCTAAACAGCACAGATTCAAACACCATCTCCATCTCTAAAACAGAGTCACAAAAAAATAATTCCAAGGACCTTAGAATGGAGGTTAAAGAATGTGATTCTGTAGTAGATTACTTAAAATGTAGAAAGAATCAGATGAAGAACAGGAATCCTTTTGCTGAGCCTAAATCAGCTAAACCAATTGCTAAACAAATTGGGCTGAGAGAAGAGAAGAAAAGTATGGCTGCTCATGGTAAGGACAATTATACTGAGATTAGAATCACCACTACACAAGCAGATGAACTCATGATGGGGCGTGAAGCAGACGCCTATGCAAATAAGATTGGTGTAGAATGTAAGCGGGGCAAGAGTTCTTCAAGCGATGACATTATGGTGCCAAAGTCTGAACATGAAAATGATTTTATCCTTGCTGAAGAAGCCCGTGAAAGCACCAACCGCAGTGAAACTGATAGCAATCCTGACAAAGTGGGAGCTGAGCTGAAACATTTTCTTTCAACTAGTGAATCAATTATTAGACATGCAGAGAAGCTATTCAATCTTGATGTGGATTGTCCTAAGATCCTGCAAAAAGATGAAACTAATGAGATATCCAATTTCAGGCTTTATTTGGATTGCGCAAATGAACTCACTGAGCTTACAAGCCTTGAAGAAATCCATGATGCCATTGAGAATCTGAAATTTTACCACAAAAATTCTGGGGAGAAGCTTTCTGCAGACAAAATCTTTGCAATGATGGAGAAAGATATAAAGTGCAATGGACTGATAAACGGTATATGGGAACGAGGTTGGAGGCATGGATTTTCTGCAGATGAGGCTGAGAGAGTTGTCAATAAAGTAGAGAACCTGATTGTAAGTGAATTAATTGAGGAGTTCATTATAAATTTATGA 2406 0.3878 MYRSFVTCDDPKGVVECRTFRIHRTCSRKMKDKIKIKKTNFETNLMNKRYKEGEVTKGSDENFIGPSSLHLIQVSRGDQSLKNMIDSWSSDLMYDGRSEDAAKDLFKGGLDMQDSLIMIRKLEEASKLEPCFKRKQTEKPKRDKIEAKMSGRMQANQFIEQSNPKGFQRPQSSADGSSSNCTEELKKVIKESLVRQKYLFPSTNSEGLKSASETPSTSPCQSSGVRTEGLADPSFSQTASKTERGHNLVAKLMGLEEAPSRSFSAAMQKHWNGEKIMNQKRPVFEIDMPEERKNNSKAEKVNPEQKTPVHFKGLMNRNFVKEPKLQVHHFNDSNSKQFDDLSHILLMKPQSTPYRESVKTRKPVPPEELSMRKLKAEAVSSKIIPQRKGSSSTNMGKEMEKDVSKRLTKEKGPEFLKEVVKLDAKGTNLTAKSSGKVKLYCHVSRTSQVNETIDKKCKARTISRKLPEKDISEPIIVARPQDQQEITSTKLRKPQSGSRIDKNEISCLNSTDSNTISISKTESQKNNSKDLRMEVKECDSVVDYLKCRKNQMKNRNPFAEPKSAKPIAKQIGLREEKKSMAAHGKDNYTEIRITTTQADELMMGREADAYANKIGVECKRGKSSSSDDIMVPKSEHENDFILAEEARESTNRSETDSNPDKVGAELKHFLSTSESIIRHAEKLFNLDVDCPKILQKDETNEISNFRLYLDCANELTELTSLEEIHDAIENLKFYHKNSGEKLSADKIFAMMEKDIKCNGLINGIWERGWRHGFSADEAERVVNKVENLIVSELIEEFIINL* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00283 801 PANTHER OS01G0228800 PROTEIN-RELATED 721 798 - -
Rops2g00283 801 MobiDBLite consensus disorder prediction 161 182 - -
Rops2g00283 801 Coils Coil 794 801 - -
Rops2g00283 801 MobiDBLite consensus disorder prediction 204 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00283 Rops-Chr2 4449006 4452151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00283 659 798 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 31.138 7.78e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00283 - - var:108346558 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00283 2 4449006 4452151 Rops2g00283 2 4449006 4452151 ECH
Rops2g00283 2 4449006 4452151 Rops5g00152 5 2353967 2357700 PCT