Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00272 ATGGAAAACCAAAACCGTCTGAAAATGCGAATCTCTCGCATGTTCCGGTCCTCATTCGGTTCCTGCAGCACCCGAAACCTAACCGATGTTATGGAAAAAGCAGTGTTTGCACCATCCAACCACCATAGCTTCCACCTTATCGACCCACCCTCCCCCAAAAGTGGACCCATTTTCAGACCCAAATGCTCCGAAACCATCCATGACCAATGTCCCCTGTCGGTTAAGGATTCTTCTGTCCCTAGACGCAAAATCTCATCACCCTTTGTCTGGGGTCCCAATTGCAACAACCTCAATGGCATGTCCTGTCCCCCCACTTCCCCAAACACCCCTCTCAACAACAAAATCCACGAGCACGAAACTAAGGTTTCAGCGAGAAACGTGAGGAACAAGAAGAAAAAGAAGAAGAAGAAGCATACCCAGAAACGAAGCAGGGCCAGAGAGATGTTCCCATTTAACTCTTGTGCTAAAGATACTAACTTTGATGGTTATTGGTGGTATAGCAGCGATGAAGATGATGAAACGGATACCCTTTTCTCCTCCAAGAGTCTCTCTTCTGATTCTTCCAGGTCTCGCCGCCGGCACCCTTCTCGCCGGAAGAATGACCGGAGTTCTGAGATGGGTGTTCTGCCATTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCAAGTGATCCATACAATGATTTTAGGACATCAATGGTGGAGATGATAGTTGAGAAGCAGATATTTTCACCAAGGGATTTGGAAAATCTCTTGCAGTGTTTTCTGTCACTGAATTCGTCTCATCATCATAAGATCATTGTTGAAGTCTTCACAGAGATTTGGGAAGCTTTATTCTCTGACTGGTTTTGA 861 0.4681 MENQNRLKMRISRMFRSSFGSCSTRNLTDVMEKAVFAPSNHHSFHLIDPPSPKSGPIFRPKCSETIHDQCPLSVKDSSVPRRKISSPFVWGPNCNNLNGMSCPPTSPNTPLNNKIHEHETKVSARNVRNKKKKKKKKHTQKRSRAREMFPFNSCAKDTNFDGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRHPSRRKNDRSSEMGVLPLHGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFSPRDLENLLQCFLSLNSSHHHKIIVEVFTEIWEALFSDWF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00272 286 ProSiteProfiles OVATE domain profile. 221 280 IPR006458 -
Rops2g00272 286 MobiDBLite consensus disorder prediction 177 206 - -
Rops2g00272 286 MobiDBLite consensus disorder prediction 125 143 - -
Rops2g00272 286 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 118 283 IPR038933 GO:0045892
Rops2g00272 286 NCBIfam uncharacterized plant-specific domain TIGR01568 219 282 IPR006458 -
Rops2g00272 286 MobiDBLite consensus disorder prediction 105 148 - -
Rops2g00272 286 Pfam Transcriptional repressor, ovate 225 282 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00272 Rops-Chr2 4343169 4344178 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops2g00272 Ovate 4.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00272 - - gmx:100776613 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00272 2 4343169 4344178 Rops2g00272 2 4343169 4344178 ECH