Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00265 ATGACTGATCTCTCTAACTCCAATAATGGCCAAGACAGCTCCTTCTTCAAGATGCCCACCATCAAGTTTCACAAGCTCTTCATCAATGGAGATTTTGTCGATTCCGTATCAGGAATGACATTTGAGACAGTAGAGCCAAGAACAGGAGAGGTGATTGCGAGAATCAGCGAGGGAACTAAAGAAGACATTGACATTGCTGTTAAAGCAGCGCGTGAAGCATTTGACTCAGGTCCATGGCCCCGCATGCCCGGTGCTGAAAGGGCAAAAATTATGATGAAATGGGCAGACTTAATTGATCAAAACGTGGAAGAACTAGCAGCATTAGATACGATTGATGCTGGCACGCTGTTCCATTTTTCTAAGGCCGTGCTAATTCCTGGAGCAGCAAATACTCTACGCTACTATGCAGGTGCTGCTGATAAAATTCATGGTGAGGTATTGAAAATGTCCCGGGAGTTCCACGCTTATACATTGATGGAACCAATTGGTGTTGTGGGACACATAATTCCATGGAATGCCCCCACTTCCATGTTCTTCACCAAGGTTAGCCCTTCCTTAGCTGCAGGGTGCACCATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTAGCTAAGCTGGCTGGAATCCCAGATGGAGTGCTTAATGTAGTACCTGGATTTGGCCCCACTGCTGGTGCTGCAATTAGCTCACACATGGACATTGATGCGGTTAGTTTTACTGGTTCAGTTGAAGTAGGACGTGAAGTAATGCAGGCTGCTGCTAGGAGTAATTTAAAACCTGTTTCACTTGAATTAGGAGGCAAGTCACCTCTTATCATTTTCGATGATGCTGATATAGACAAAGCTGCTGAGCTTGCTCTCTTTGGCATCGTATTTAACAAGGGAGAAGCTTGTGTTGCAAGTTCTCGTGTGTTTGTCCAGGAAGGGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTCGTTGGGGATCCTTTTGATCCTAAAACTCAGCAAGGACCTCAGGCTGACAAGAATCAATTCGAAAAAATTCTATCATATATTGAGCATGGAAAGAGAGAAGGAGCCACCCTCTTGACTGGAGGTAAAACAGTGGGCAGCAAGGGCTACTACATAGAACCTACAATTTTCTCCAATGTAAAGGAGGACATGCTTATAGCACAGGATGAAATATTTGGCCCTGTGATGACACTGATGAAGTTTAAGACTATGGAGGAAGCAATTAAGAGTGCTAACAATACAAAATATGGGCTAGCAGCAGGCATAGTGACCAAGAACTTGGATACTGCAAACACTGTGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATTAACTGCTATTTTATCATAGGAAATGACATTCCTTTTGGAGGGTATAAGATGAGCGGATTTGGAAGAGATTTGGGATTGGAAGCCCTTCACAAGTACTTACAAGTTAAATCTGTTGTAACTCCTATTTACAATTCTCCTTGGCTTTGA 1515 0.4376 MTDLSNSNNGQDSSFFKMPTIKFHKLFINGDFVDSVSGMTFETVEPRTGEVIARISEGTKEDIDIAVKAAREAFDSGPWPRMPGAERAKIMMKWADLIDQNVEELAALDTIDAGTLFHFSKAVLIPGAANTLRYYAGAADKIHGEVLKMSREFHAYTLMEPIGVVGHIIPWNAPTSMFFTKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDAVSFTGSVEVGREVMQAAARSNLKPVSLELGGKSPLIIFDDADIDKAAELALFGIVFNKGEACVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKTQQGPQADKNQFEKILSYIEHGKREGATLLTGGKTVGSKGYYIEPTIFSNVKEDMLIAQDEIFGPVMTLMKFKTMEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIRAGIVWINCYFIIGNDIPFGGYKMSGFGRDLGLEALHKYLQVKSVVTPIYNSPWL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00265 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 15 494 - -
Rops2g00265 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Rops2g00265 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Rops2g00265 504 FunFam Aldehyde dehydrogenase3 274 463 - -
Rops2g00265 504 SUPERFAMILY ALDH-like 16 500 IPR016161 GO:0016491
Rops2g00265 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
Rops2g00265 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Rops2g00265 504 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 28 291 - -
Rops2g00265 504 FunFam Aldehyde dehydrogenase, putative 466 492 - -
Rops2g00265 504 Pfam Aldehyde dehydrogenase family 33 494 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00265 Rops-Chr2 4212218 4219897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00265 17 504 Aldehyde Dehydrogenase Gene Family AT3G24503 71.166 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00265 K12355 - gmx:100527654 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00265 2 4212218 4219897 Rops5g00175 5 2709545 2713956 PCT