Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00263 ATGTATTTCACTGGCAACTCTAAGAATGACCATGCAGTGAACTTCACCACCCCGAGAGGCTTTCTCACCAAACTCAAATCACGAGTCAATGAAACTTTCTTCCCTGACGATCCCCTTAGATGTTTCAAGAATGAAGAAAAGCCACTGCGCAAGGTCCTCAAAGGGGTTCAGTGTGCCTTCCCGATCTTCGAGTGGCTCCCCAGTTACACTTGGTCCATCTTTTACTCTGACTTTCTCGCTGGCCTTGCCATTACCAGTCTTACTGTCCCTCAATGCATTAGCTTTGCCAAACTCGCCTACCTTCCTCCCATCATTGGCCTCCATAGTGGCTTTGTCCCACCTCTTGTGTATGCCATTTTTGGGACCTCAAGGCATATGTCAGTGGGGACATCAGCTTCATTATCATTGCTTATATATCAAAATATTTCGACCGTAGCAAACCCAGAAGACGATCTGAATCTTTACATTCGTTTGGTTTTCACAACTACATTTGTTGCTGGTGCTTTCCAGAGCAAGAGGAACTCAAAACTCTTTTGGCTATCAGCTTTTGCCCCAATAACGACTGTAATAGTTGCTGGTGTTTTGACTTACCTCATTAACGGCCAAAGACATGGAATTCCAATTGGAGGAATGGCAATAGGAAGAAGCTTTTCTGTGGTTGGAAAGACACCTCATGATGGGAACAAAGAGATGACAGCTTTTGGTCTTATGAACTTATGTGGTTCTTTTACTTCATGTTACCTGACTACTGGATCAATTTCCAAAACGGCTGTGAATTACAGTGCGGGGTGTAAAACAGTTATGTCAAACATAGTTCAGGCGTCCCTAATGGCATTCATACTAAAGTTTTTAGCACCATTTTTTGGTTACACCCCTCTTTTTGCTCTATCAGCTATTACAATCTCCACCGTGATGGGGTTGATTAATTATACCGAAGTCATTTATCTTTATAAAGTAGACAAGTTTGATTTTATTATTTGCATGGCGGCCTTTCTTGGAGTAATCTTTATAGCCCCGGATGTTGGCTTCATGTTGTCAGTTGGTCTTAGTGTGCTTAGGGCACTCTTATATGTGGCTAGGCCTGTGGCATGTAGGCTTGGAAAGTTACCTGACTTGGATTTATATCGAGATGTTGAGCAGTACACAGTTTCAACATCCCCAGGTGTTCTAATTGTACAACTTGGTTCTCCCATTTACTTTGCAAATTCATCCTATATCAGAGAAAGAATTATGAGGTATATTCGAAGTGAGCAAAACTCTAGTGGAGATATCGTGGAACAGATCATACTAGATTTGTCAGGAGTGACATCCATTGACACCGCTGCTATTGAAGGATTGTTGGAAACAAATAAAATCTTCGAAAAGAATAGAATGAAGATGTCATTAGTAAACCCAAGGATGGAGGTTTTGGAGAAGTTGATCTCTTCCGAGTTTATCGACAAGATTGGGAAGGAGTCGGTGTTTCTAACATTGAACGATGCAATAAAGGCAAGTCAATACTCACTTGGTAAAGCAAAGAAATGA 1524 0.4154 MYFTGNSKNDHAVNFTTPRGFLTKLKSRVNETFFPDDPLRCFKNEEKPLRKVLKGVQCAFPIFEWLPSYTWSIFYSDFLAGLAITSLTVPQCISFAKLAYLPPIIGLHSGFVPPLVYAIFGTSRHMSVGTSASLSLLIYQNISTVANPEDDLNLYIRLVFTTTFVAGAFQSKRNSKLFWLSAFAPITTVIVAGVLTYLINGQRHGIPIGGMAIGRSFSVVGKTPHDGNKEMTAFGLMNLCGSFTSCYLTTGSISKTAVNYSAGCKTVMSNIVQASLMAFILKFLAPFFGYTPLFALSAITISTVMGLINYTEVIYLYKVDKFDFIICMAAFLGVIFIAPDVGFMLSVGLSVLRALLYVARPVACRLGKLPDLDLYRDVEQYTVSTSPGVLIVQLGSPIYFANSSYIRERIMRYIRSEQNSSGDIVEQIILDLSGVTSIDTAAIEGLLETNKIFEKNRMKMSLVNPRMEVLEKLISSEFIDKIGKESVFLTLNDAIKASQYSLGKAKK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00263 507 Gene3D STAS domain 360 500 IPR036513 -
Rops2g00263 507 ProSiteProfiles STAS domain profile. 379 498 IPR002645 -
Rops2g00263 507 Pfam STAS domain 381 494 IPR002645 -
Rops2g00263 507 PANTHER SULFATE TRANSPORTER 211 498 IPR001902 GO:0016020|GO:0055085
Rops2g00263 507 CDD STAS_SulP_like_sulfate_transporter 387 491 - -
Rops2g00263 507 Pfam Sulfate permease family 211 329 IPR011547 GO:0016020
Rops2g00263 507 Pfam Sulfate permease family 74 170 IPR011547 GO:0016020
Rops2g00263 507 SUPERFAMILY SpoIIaa-like 380 497 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00263 Rops-Chr2 4203869 4208602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00263 172 506 Inorganic Solute Cotransporters AT5G19600 49.067 3.63e-118 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00263 K17471 - gmx:100789107 420.624