Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00262 ATGCATTTCACTGGGAACTCTGAGAATCACAATGCAGTGAACTTCACCACCCCTAGAGGGTCTCTCACCAAACTCAAATCAGGAGTCAAAGAAATGTTCTTCCCTGATGATCCCTTCATGCATTTCAAGAATGAACAAAAGTCACTGCTCAAGATCCTCAAAGGGGTTCAGTATTTCATCCCAATCTTCGAGTGGCTCCCTAATTACACTTGGCACATGTTTTACTCTGACTTCCTCGCTGGCCTTGCCATCACAAGCCTCACTGTCCCTCAAGGCATTAGTTTTGCCAAACTCGCCTACCTTCCTCCCATCATTGGCCTCTATAGTGGCTTTATCCCACCTCTTGTTTATGCTATTTTTGGGAGTTCAAGGCACATGTCTGTGGGGACGTCAGCTTTATTATCATTGATTGTATATCATAATATTTCGACGGTTGCAAATCCAGAAGAAGACCGAAAGCTCTATGTTCATTTGATTTTCACAACTACCTTTATCGCCGGCGTCTTCCAAGCTTGTTTGGGTATTCTCAGGTTGGGGATATTGGTGGATTTCTTGTCCCGTCCTACCATCACTGGCTTCGTCGGAGGGGCATCAATGGTTCTCTGCGTCCAACAACTGAAGGGCATTTTCGGAATGAAATATTTTGAGAGTAAAATGGACCTTGTAACACGGGTGAAGGGCTTATGGACCCATAGACATGAGAGGAAGAGGAACCCAAAACTCTTTTGGGTATCAGCTTTAGCTCCAATCACGACTGTAATAGTTGGTAGTATTTTAACTTATCTTGTTAATGGCCAAAGACATGAAATTCAAACTGTGGGTCATCTAGAAAAAGGAATAAACCCATTGTCCATCCAGGATTTTAACTTTGACAGTAAATATTTACCTGTGGTACTAAAAGCTGGTTTCATTACAGGCTTATTGTCATTGGCGGTAGGAATATCAATAGGAAGAAGCTTTTCAGTGGTTGAAAAGACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGTCTTATGAACTTATGTGGTTCTTTTACTTCATGTTACCTGACTACCGATTCTGATTCGGTTATGTTATGTGATACTAAGGTTGGCGTTAGCGTCCTTAGGGCACTCTTATATGTGGCTAGGCCTGCGGCATGTAGGCTTGGAAAGTTACCTGACTTAGATTTATATCGAGATGTTGAGCAGTATACAGTTTCAACATTTCCAGGAGTGACATCCATTGACACCACTGCTATTGAAGGATTGTTGGAAACAAATAAAATCTTCGAAAGGAATAGAATCAAGATGTCATTAGTAAACCCAAGAATGGAGGTTTTGGAGAAACTGATATCATCCAAGTTTGTTGACAAGATTGGGAAGGAATCATTTTTCTTAACATTGAATGATGCAATTGAGGCAAGTCAATATTCACTTTGTAAATCGAAGCCAAATGATCCTCAAGAAATGGTTCGAATAATTATTGTATAA 1476 0.4079 MHFTGNSENHNAVNFTTPRGSLTKLKSGVKEMFFPDDPFMHFKNEQKSLLKILKGVQYFIPIFEWLPNYTWHMFYSDFLAGLAITSLTVPQGISFAKLAYLPPIIGLYSGFIPPLVYAIFGSSRHMSVGTSALLSLIVYHNISTVANPEEDRKLYVHLIFTTTFIAGVFQACLGILRLGILVDFLSRPTITGFVGGASMVLCVQQLKGIFGMKYFESKMDLVTRVKGLWTHRHERKRNPKLFWVSALAPITTVIVGSILTYLVNGQRHEIQTVGHLEKGINPLSIQDFNFDSKYLPVVLKAGFITGLLSLAVGISIGRSFSVVEKTPHDGNKEMIAFGLMNLCGSFTSCYLTTDSDSVMLCDTKVGVSVLRALLYVARPAACRLGKLPDLDLYRDVEQYTVSTFPGVTSIDTTAIEGLLETNKIFERNRIKMSLVNPRMEVLEKLISSKFVDKIGKESFFLTLNDAIEASQYSLCKSKPNDPQEMVRIIIV* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00262 491 Gene3D STAS domain 384 473 IPR036513 -
Rops2g00262 491 ProSiteProfiles STAS domain profile. 406 470 IPR002645 -
Rops2g00262 491 CDD STAS_SulP_like_sulfate_transporter 406 463 - -
Rops2g00262 491 Pfam Sulfate permease family 74 233 IPR011547 GO:0016020
Rops2g00262 491 PANTHER SULFATE TRANSPORTER 404 471 IPR001902 GO:0016020|GO:0055085
Rops2g00262 491 Pfam STAS domain 404 466 IPR002645 -
Rops2g00262 491 ProSitePatterns SLC26A transporters signature. 103 124 IPR018045 GO:0008271|GO:0008272
Rops2g00262 491 SUPERFAMILY SpoIIaa-like 404 469 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00262 Rops-Chr2 4182442 4188862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00262 365 480 Inorganic Solute Cotransporters AT5G19600 37.107 1.93e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00262 K17471 - gmx:100789107 447.973