Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00261 ATGAAGAAGGAAGCTTACTCCTCCATTCTTACACTCCTCGTTGCTTTCTTTGTAGGCACACTCTCCCTCTGTGCCTCCCTCCAAGACAATGGAGCCCTCACCGATGCAGAAGCATTGTACATCAAACAACGTCAGCTACTATATTACAGGGACGAGTTTGGCGACAGGGGTGAAAATGTCACCGTAGACCCATCCCTTGTTTTCGAAAATGATCGTATCAGAGATGCTTACATAGCATTACAAGCTTGGAAAACAGCCATTCTCTCGGATCCACTAAACTTCACAGCTAATTGGGTTGGATCCGATGTGTGCAACTACACCGGGATTTACTGTGCTCAGGCGCTAGACAACCCCAAGATCCAAACCGTCGCCGGCATTGATCTCAACCACGCCGACATTGCTGGTTATTTACCAGAAGAGCTTGGCCTTCTGGTCGATCTTGCACTTTTCCACATCAATACTAATCGTTTTTGTGGCACTGTGCCCCACAAGTTTGACAGGTTGAAGCTTCTCTTTGAACTGGATCTCAGTAACAACAGGTTTGCAGGGAAGTTCCCAGAAGTAGTGTTACAGCTTCCTTCACTCAAATTCTTAGACATAAGGTTTAATGAATTTGAAGGGACTGTGCCGAGGGAGTTGTTTGACAAGGATCTGGATGCCATTTTCATAAATGACAACAGATTTGTGTTTGATCTTCCTGACAATTTTGGAAACTCTCCAGTCTCAGTTATTGTTCTTGCCAACAACAAATTCCATGGGTGCATTCCAGCTAGTATTGGAAACATGTCAAACTTGAACGAAATCATTCTGATGAACAATGCTTTCAGGTCCTGTTTGCCTTCAGAGATAGGGTTTCTGAAGAACATGACAGTTTTTGATGTGAGCTTCAATCAGCTGTTTGGTCCCTTGCCTGATACCATTGGAAATGTGGTGAGCCTGGAACAGTTGAATGTTGCTCATAATTTCCTTTCTGGTAAAATCCCTGCAAGCATTTGCATGTTGCCTAATCTTCAAAACTTTACCTATTCGTATAACTTCTTTACTGGTGAGCCTCCCGCATGCTTGAGCTTGGCGGCGTTTGACGACAAGGGGAACTGCTTGCCGTCGAGGCCGTTGCAAAGGTCTCTGGGGCAATGTAAGTTGTTCTTGTCTAAGCCTGTGAATTGTAACGCATTTAGCTGTAAGCCATTTGTTCCTTCACCTTCCACACCGCCTGTAGTGGTTCCTTCACCTTCGCCCCCACCGGTAGTGACACCTTCGCCACCACCTGCAGTGGTTCCTTCACCACCACCGGTAGTTACACCTTCGCCACCACCTGCAGTGGTTCCTTCACCTCCTTCATCACCACCATCAGTGGTACCTTCACCTCCTTCGCCACCACCTGTTTATACTCCTCCACCACCACTGTCCCCGTCCCCACCGGTGTACACTCCACCTGTGTATTTACCACCGCCACCACCCCCTTCACCGTCGTCGCCTCCATCTTCTCCTCCACCACCTCCTGTGGTATCACATCCTCCACCATCTCCACCCCTACCCCCATCCTCTCCCTCACCCACTCCAACGCCACCATATTGTGTGAGGTCTCCACCGCCTCCGCCGCCTGCTCCTGTATTCTCCCCACCACCACCTTCTCCTTATTACAGCTCACCACCACCATCCCCTCCAACTCATTTACCCCCTCACTCATCCCCACCACCTGTTTATCCGTATTTATCACCCCCACCTCCTCCCTCAGTCCACTCACCACCCCCACCATCCCCACCACCTTGTATAGAACCTCCTCCACCCCCATCACCACCACCTTGTGAAGAACATTCACCCCCACCCCCATCATCTCCTTCTCCCACACCTTACCTCCCACCACCCTCACCCTCACCATCTCCCCCGCCCCCACCATTCTATGTTTCTCCACCTCCACCAGTTCAATATACTTCCCCATCACCACCTCCTCCTCCCCCTGTTCATTACAGTTCACCACCACCAACCCCTGTTCATTACAGTTCCCCACCACCAACCCCTGTTCATTACAATTCACCACCACCAACAACCCCTGTCCATTACAGTTCCCCACCACCACCAGTTTACCATTCTCCACCGCCAGCATCGCCGCCGCCGTGCGAAACTCCATCTCCATCAATTGAACACGGAAACCCACCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTATCTTTGGAGTTCCATACGCATCGCCTCCACCACCTCCTTTCTATTGA 2241 0.5025 MKKEAYSSILTLLVAFFVGTLSLCASLQDNGALTDAEALYIKQRQLLYYRDEFGDRGENVTVDPSLVFENDRIRDAYIALQAWKTAILSDPLNFTANWVGSDVCNYTGIYCAQALDNPKIQTVAGIDLNHADIAGYLPEELGLLVDLALFHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPEVVLQLPSLKFLDIRFNEFEGTVPRELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNKFHGCIPASIGNMSNLNEIILMNNAFRSCLPSEIGFLKNMTVFDVSFNQLFGPLPDTIGNVVSLEQLNVAHNFLSGKIPASICMLPNLQNFTYSYNFFTGEPPACLSLAAFDDKGNCLPSRPLQRSLGQCKLFLSKPVNCNAFSCKPFVPSPSTPPVVVPSPSPPPVVTPSPPPAVVPSPPPVVTPSPPPAVVPSPPSSPPSVVPSPPSPPPVYTPPPPLSPSPPVYTPPVYLPPPPPPSPSSPPSSPPPPPVVSHPPPSPPLPPSSPSPTPTPPYCVRSPPPPPPAPVFSPPPPSPYYSSPPPSPPTHLPPHSSPPPVYPYLSPPPPPSVHSPPPPSPPPCIEPPPPPSPPPCEEHSPPPPSSPSPTPYLPPPSPSPSPPPPPFYVSPPPPVQYTSPSPPPPPPVHYSSPPPTPVHYSSPPPTPVHYNSPPPTTPVHYSSPPPPVYHSPPPASPPPCETPSPSIEHGNPPPAPVYEGPLPPIFGVPYASPPPPPFY* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00261 746 Pfam Leucine rich repeat N-terminal domain 79 111 IPR013210 -
Rops2g00261 746 Gene3D Ribonuclease Inhibitor 239 369 IPR032675 -
Rops2g00261 746 FunFam Leucine-rich repeat extensin-like protein 1 77 238 - -
Rops2g00261 746 SUPERFAMILY L domain-like 77 356 - -
Rops2g00261 746 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 522 - -
Rops2g00261 746 MobiDBLite consensus disorder prediction 405 727 - -
Rops2g00261 746 Pfam Leucine Rich Repeat 312 332 IPR001611 GO:0005515
Rops2g00261 746 Gene3D Ribonuclease Inhibitor 76 238 IPR032675 -
Rops2g00261 746 PRINTS Proline rich extensin signature 402 414 - -
Rops2g00261 746 PRINTS Proline rich extensin signature 418 439 - -
Rops2g00261 746 PRINTS Proline rich extensin signature 439 455 - -
Rops2g00261 746 PRINTS Proline rich extensin signature 457 474 - -
Rops2g00261 746 FunFam Leucine-rich repeat extensin-like protein 5 239 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00261 Rops-Chr2 4149118 4152029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00261 1 394 Trihelix Transcription Factor Family AT4G18670 73.165 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00261 - - gmx:100814585 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00261 2 4149118 4152029 Rops2g00261 2 4149118 4152029 ECH