Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00256 ATGGATTTAGAAGAGAAGTTCCTTGCTAAAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGTACTCCCGAAAAAAATGGCCATTCAGATGATGCTTCGAGAAGTTCAGAACTCCTTCAGGAGTTTCTGAAATGTGGTCCAAAGAAGGAACTTCTTCGAATGTGCTTTGACAAGGACAAAAAGAACATTTCATCAAAAAGCAGGATGACTGAAACTAGGTCAACTGGTAAGACAATTAAGAAACAAGACACTAAAAAGGTTTCTAGTGTCAGCCATCAGCCCTCAAGGAAGCAACACAGGAAGAGTGAAAACCCCACACGACTCATACCTCCTCCTGACCAGTCTTCTGAGTTTGGGCATTCAAACACTTGGGTCTGTAAAAATGCTGCATGTAGGGCGGTTCTATCTATAGATGACACATTTTGTAGACGGTGCTCTTGCTGTATTTGCCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACATCTGAATCTACTCAAGGGGACTCTTGTGGGCTGTCTTGCCATATTGAATGTGCCCTTCAACATGAAAAAGTGGGAGTTATTGATCATGGACAACTGATGCAACTAGATGGTGGTTATTGTTGTGCATCCTGTGGTAAAGTTACAGGGATACTTGGATGCTGGAAAAAACAACTAAATATAGCAAAAGATGCCCGGCGTGTAGATGTACTCTGTTATAGGATATATTTGAGCTATAGGCTCCTGGATGGAACTTCGAAATTTAAAGACTTGCACCAAATGGTACAAGAGGCAAAGGCTAAACTGGAGACAGAAGTCGGTCCTGTTAATGGGGTTTCTGCTAAGATGGTACGAGGCATTGTCAGCAGGCTCCCTATTGCCAGTGATGTGCAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATAGCTGGCTGGCCACTGTCCCCAATGTAAAGCCAGATTCCAGAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTAACAGCTTCCTCGGTCAAAATCATTTTAATTGAAATGTCAAATATATGTTCTGAAGACATTAAGGGATACAAGCTGTGGTATTACAAGAGTCGGGATGAATCACACACAAAGGATCCTGTTTCTGTGTTTCCCAAATCTCAGAGGAGGATTTTGATATCCAACCTTCAGCCTTGCACAGAATATACTTTTCGGATTGTATCTTATACTGATGCAGGTGACCTGGGTCATTCTGAGGCTAAGTGTTTCACCAAGAGCATCGAGATAATTCAAAAGAATCCCTCTTCGTCTGTTGCCATGAATCATAAAAAAGAGAACCTTCAAACTGGGGGCAACTCTTCTGGCCCCAAGATGGAGCTCGATCCCACAATGAAAGAGTCTGGATTTAAGGTTCGAGACCTTGGGAAAATTTTGCATCTTGCTTGGGCTCAAGAACAAGGTTACTTGGAGGAGTTTTGCTGTGGTGATATGAAAAATTGCTGTGGACAAAGTGAAATGAACAATCCTAAAATTCCAGAAGCAAAATTACCTTCAGATTCACGAGGCCTTGATTTAAATGTGGTTTCAGTGCCTGATTTAAACGAAGAGCTAACACCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGTTGCACTTTGATGCAGGCTGTTGAGGCAGATGATGATGCTGCTTCTCATGATCTAGAGAAAAATGGTTTTGCAAGATCACATGGGAGTGGTGATTCCCAAACCTGGGCCCATGGGCCAACAGAAGTGTCAGCTGTGGACTCTCGTGTAGATGTGTGCCGGAAAAGGATGGCAAGTAGAAACGAAGAGACACATGATTGTGACAGCACTTTGATAAATGGTTCTCCATTACGCATATCTGATGGTTCGTGCTCCTTGGACGAGAACTTTGAGTATTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCGACAGAGCAAGAACGCAGGGTGGTTAATACCTTCATTCAAACTCTTATCGATGATCCAAGTAGTTTGGCAGGGCAGCTTGTTGACTCCTTTTCTGATATTATATCCAGCAAGAGACCAAGAAATGGATTCTGTAGTAAAGCTGTGGCATCAAAATAA 2160 0.4245 MDLEEKFLAKVSGVQSLSSSVQSTPEKNGHSDDASRSSELLQEFLKCGPKKELLRMCFDKDKKNISSKSRMTETRSTGKTIKKQDTKKVSSVSHQPSRKQHRKSENPTRLIPPPDQSSEFGHSNTWVCKNAACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTQGDSCGLSCHIECALQHEKVGVIDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLDGTSKFKDLHQMVQEAKAKLETEVGPVNGVSAKMVRGIVSRLPIASDVQKLCSLAIEKADSWLATVPNVKPDSREGSLPAACKFVFEEVTASSVKIILIEMSNICSEDIKGYKLWYYKSRDESHTKDPVSVFPKSQRRILISNLQPCTEYTFRIVSYTDAGDLGHSEAKCFTKSIEIIQKNPSSSVAMNHKKENLQTGGNSSGPKMELDPTMKESGFKVRDLGKILHLAWAQEQGYLEEFCCGDMKNCCGQSEMNNPKIPEAKLPSDSRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLMQAVEADDDAASHDLEKNGFARSHGSGDSQTWAHGPTEVSAVDSRVDVCRKRMASRNEETHDCDSTLINGSPLRISDGSCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISSKRPRNGFCSKAVASK* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00256 719 MobiDBLite consensus disorder prediction 67 120 - -
Rops2g00256 719 SUPERFAMILY Fibronectin type III 333 411 IPR036116 GO:0005515
Rops2g00256 719 Gene3D Immunoglobulins 315 424 IPR013783 -
Rops2g00256 719 PANTHER VIN3-LIKE PROTEIN 2-RELATED 17 714 IPR044514 GO:0010048|GO:0040029
Rops2g00256 719 MobiDBLite consensus disorder prediction 11 39 - -
Rops2g00256 719 CDD FN3 332 411 IPR003961 GO:0005515
Rops2g00256 719 MobiDBLite consensus disorder prediction 12 28 - -
Rops2g00256 719 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Rops2g00256 719 ProSiteProfiles Fibronectin type-III domain profile. 327 426 IPR003961 GO:0005515
Rops2g00256 719 MobiDBLite consensus disorder prediction 67 89 - -
Rops2g00256 719 Pfam Fibronectin type III domain 333 413 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00256 Rops-Chr2 4027991 4035304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00256 124 710 PHD Gene Family AT3G24440 49.502 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00256 - - gmx:100816128 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00256 2 4027991 4035304 Rops2g00256 2 4027991 4035304 ECH
Rops2g00256 2 4027991 4035304 Rops5g00186 5 2887460 2896585 PCT