Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00239 ATGTCTTCTGCGGAAACAATAGTAGTACATGCTTTCCTTCTCTTCACTTTTTTATACCTTGTATACACGGTGTTCTTCCATCCAAAACATAGAAACGATGATCGGAAAATGCCACCAGGTCCACCCGGGTTGCCAATTATTGGGAACCTCCACATGTTGGGTACCCTTCCACATCGTTCACTTCGATCTCTGTCCAAAAAATATGGCCCCATCATGTCTTTGCAACTGGGTCAAGTCCCAGCTGTTGTGGTTTCATCCTCTGAGGCTGCTCAGTTATTCCTCAAGACCCACGACATGGTTTTCGCAAGCAGGCCAAAGATTCAAGGATCTGAACTCATGTCCTACGGCTCCAAGGGCTTGTCATTTTCTGAGTATGGTCCATACTGGCGCAGCGTGAGGAAATTAAGCACTTTGCAACTTCTCAGCACATCAAAAGTTGAGTTCTTTGCTCCTATTAGGAAGGAGGAGCTAGGTCTCGTGGTGAAGTCACTAGAGAAAGCCGCAGTTGTGGGTCAGCTTGTGAACCTTAGTGAGGTTGTAGAGAACCTTATAGAGGATATAGTTTATAAGATGATACTGGGTCGCAATAAGTATCACCAATTTGACTTGAAGAGAATAGTTCAAGAAGGAATGGCCTTGATCGGAGCTTTTAATCTGGCAGATTATGTGCCTTGGCTGGGCGCATTTGATCTTCAGGGATTAGCGCGGGGCTACAAGAAAATCAATAAAGAACTTGATGAGGTGCTGGAGAAGATAATAACAGAGCATGAACAAGCTGCTAATGTGGACGAAAGGCATCATAAAGACTTCGTAGACATACTGCTCTCAATGATGCAACAATCTATGGATCTTCAGAGTGAACAAAACCATATCATTGATCGAACTAACATCAAGGCTATTTTACTAGATCTGATCTTTGCAGCAGTTGAAACATCTGCTACCGCAATTGAGTGGGCTTTATCAGAGCTTCTGAGGCATCCAAGGGTGATGAAAATCCTTCAAGATGAGATAGAGAACAAAGTAGGAATGAGGAGAATGGTGGAAGAGAAAGATTTGATGAAGTTGAGTTACTTGGATATGGTGGTGGATGAGACCTTAAGATTGTATCCTGTGGGACCCTTACTGCTCCCTCGAGAATGCAGAGAGAGCATTACAATTGATGGTTATTATATAAAGAAAAAGTCACGAGTCATTGTAAATGCATGGGCAATAGGGCGGGATCCTAATGTGTGGTCGGATAATGCTGAAACATTTTATCCAGAGAGATTTATCAACAAAAAAATAAATTATCAAAGACCAGATTTTAAATTCATACCATTCGGTTCTGGTCGTAGAGCTTGTCCTGGGATTCAACTGGGTTTGGTTACCGTTAAACTGGTTATAGCTCAATCGGTGCATTGCTTTAATTGGGAACTTCCATCTAATGTTAGTCCTGACAACTTGAATATGCAGGAGAAATTTGGGCTCACAATACCAAGAGCTCAGCAATTGCACGCGATACCAACTTACCGTTTAGCTAGTGATGCTTAG 1530 0.4248 MSSAETIVVHAFLLFTFLYLVYTVFFHPKHRNDDRKMPPGPPGLPIIGNLHMLGTLPHRSLRSLSKKYGPIMSLQLGQVPAVVVSSSEAAQLFLKTHDMVFASRPKIQGSELMSYGSKGLSFSEYGPYWRSVRKLSTLQLLSTSKVEFFAPIRKEELGLVVKSLEKAAVVGQLVNLSEVVENLIEDIVYKMILGRNKYHQFDLKRIVQEGMALIGAFNLADYVPWLGAFDLQGLARGYKKINKELDEVLEKIITEHEQAANVDERHHKDFVDILLSMMQQSMDLQSEQNHIIDRTNIKAILLDLIFAAVETSATAIEWALSELLRHPRVMKILQDEIENKVGMRRMVEEKDLMKLSYLDMVVDETLRLYPVGPLLLPRECRESITIDGYYIKKKSRVIVNAWAIGRDPNVWSDNAETFYPERFINKKINYQRPDFKFIPFGSGRRACPGIQLGLVTVKLVIAQSVHCFNWELPSNVSPDNLNMQEKFGLTIPRAQQLHAIPTYRLASDA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00239 509 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 CDD CYP71-like 67 497 - -
Rops2g00239 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Rops2g00239 509 SUPERFAMILY Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 Gene3D Cytochrome P450 28 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00239 509 PANTHER CYTOCHROME P450 93A3-LIKE 16 506 - -
Rops2g00239 509 FunFam Cytochrome P450 83B1 25 500 - -
Rops2g00239 509 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00239 Rops-Chr2 3744375 3746200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00239 13 508 Cytochrome P450 AT5G07990 41.386 2.46e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00239 - - psat:127113357 739.184