Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00238 ATGTTGGGTACCCTTCCATATCGCACACTTCAGTCTCTTTCCAAAAAATATGGACCCATCATGTCCTTGCAACTGGGACAAGCCCCAGCTATTATGGTTTCTTCCTCTGAGGCTGCTCAGTTATTCCTCAAGACCCACGTCGTCTTTTTCGCAAGCCGACCAAAGATTCAAGCATCTAAACTCATCCAATCAAAAGTTGAGCTTTTTGTTCCTATTAGGAAGGACGAGCTAGGTCTCGTGGTGAAGTCACCGGAGAAAGCCGCAGTGGTGGGTCACTTAGTGAATCTTAGCGAGGTTGTAGAGAACCTTATAGAGGACATAGTGTATAAGATGGTATTGGGTCGCAGTAAGTATCACCAATTTGACTTGAAGAGCCTAGTTCGTGAAGGACTAACGCGGGCCTGCAAGAAAATCAATAAAACAGTTGAGGAGGTGCTAGAGAAGATAATAACAGAGCATGAACAAGCTTGTGATGAAGACAAAAGGCATCATAAAGACTTCGTAGACATACTTCTCTCAACGATGCACCAATCTATGGATCCTCAGAGTGAACAAAATCATATCATTGATCGCACCAACATCAGGGCTATTTTACTAGATATGATTTTAGGGACAAGTGCCACATCTGCTGGCACGATTGTCTGGGCTTTATCAGAGCTTTTGAGGCATCCAAGGGTGATGAAAATACTTCAAGATGAGATAGAGAATGAAGTAGGAATGAGGAGAATGGTGGAAGAAAAAGATTTGATGAAGTTGAGTTACTTGGATATGGTGGTGGATGAGACCTTAAGGCTGTATCCTGGTGCACCCTTGCTAGTTCCTCGTGAATCCAGAGAGAGCATCACAATTGATGGTTATTATATAAAGAAAAAATCTCGAGTTTATACAAATGCAAGGGCGATAGGGAGGGATCCTAACGTGTGGTCGGATAATGCTGAAACATTTTATCCAGAGAGATTTATCGACAAGAAAATCAATTATTATGGACAAGTGTTTCAATCTATACCATTTGGTTCTGGTCGTAGAACTTGTCCTGGGATTCAACTGGGTTTGACGACAGTTAGATTGGTTATAGCTCAATTGGTGCATTGTTTTAATTGGGAACTTCCATTTAATGTTAGTCCAGCCAACTTGAACATGAAGGAGAAATTTGGGCTCACAATGCCAAGAGCTGAGCAGTTGTAA 1185 0.4194 MLGTLPYRTLQSLSKKYGPIMSLQLGQAPAIMVSSSEAAQLFLKTHVVFFASRPKIQASKLIQSKVELFVPIRKDELGLVVKSPEKAAVVGHLVNLSEVVENLIEDIVYKMVLGRSKYHQFDLKSLVREGLTRACKKINKTVEEVLEKIITEHEQACDEDKRHHKDFVDILLSTMHQSMDPQSEQNHIIDRTNIRAILLDMILGTSATSAGTIVWALSELLRHPRVMKILQDEIENEVGMRRMVEEKDLMKLSYLDMVVDETLRLYPGAPLLVPRESRESITIDGYYIKKKSRVYTNARAIGRDPNVWSDNAETFYPERFIDKKINYYGQVFQSIPFGSGRRTCPGIQLGLTTVRLVIAQLVHCFNWELPFNVSPANLNMKEKFGLTMPRAEQL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00238 394 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 337 346 IPR017972 GO:0005506|GO:0016705
Rops2g00238 394 SUPERFAMILY Cytochrome P450 3 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 PRINTS E-class P450 group I signature 256 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 PRINTS E-class P450 group I signature 344 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 PRINTS E-class P450 group I signature 14 33 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 PRINTS E-class P450 group I signature 334 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 Gene3D Cytochrome P450 1 389 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 Pfam Cytochrome P450 112 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 PANTHER CYTOCHROME P450 93A3-LIKE 1 62 - -
Rops2g00238 394 PRINTS P450 superfamily signature 204 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 PRINTS P450 superfamily signature 257 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 PRINTS P450 superfamily signature 335 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00238 394 FunFam Uncharacterized protein 127 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00238 Rops-Chr2 3687121 3690407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00238 2 394 Cytochrome P450 AT3G26330 34.286 3.11e-80 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00238 - - psat:127113357 536.954