Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00234 ATGTCTTCTGCAGCAGCAATAGTAGTACATGCTTTCCTTCTTTTCACTTTCGTATACCTTGTTTATACCGTCTTCTTACATCCAAAACATAGAAACGATGATCGGAAAAATCCACCAGGTCCGCCAGCACTGCCAATTATTGGGAACCTCCACATGTTGGGTACCCTTCCACATCGCTCACTTCAGTCTCTATCCAAAAAATATGGTCCCATCATGTCCTTGCAATTGGGTCAAGTCCCAACTATTGTGGTTTCATCCTCTGAGGCTGCAGTGTTATTCCTCAAGACCCACGACATCGTTTTCGCAAGCCGACCAAAGTTTCAAGGATCTGAGATCATGTCCTACGGCTCCAAGGGCATGGCGTTTTCTGAGTATGGTCCATACTGGCGCAGTGTGAGGAAATTATGCACTTTGCAACTTCTCAGCACATCAAAAGTTGAGTCCTTTGCTCCTATTAGGAGGGAGGAGCTAAGTCTTGTGGTGAAGTCACTTGAGAATGCCGCAGCGGTGGGTCAGCTCGTGAATCTTACCGAGGTTGTAGAGAACCTTATAGAAGATACAGTGTATAAAATGATACTGGGTCGCAATAAGTATAAGCAATTTGACTTGAAGAGGCTGGTTCAAGAAGCACTGGCATTGACTGGAGCTTTTAATCTGGCAGATTATGTGCCTTGGTTAGGCCCATTTGATCTTCAGGGACTAACACGGAGCTGGAAGAAAATAAGTAAAACACTTGATGAGGTGCTGGAAAAGATAATAACAGAGCATGAACAAGCTGCTAATGTAGACAATAGGCATCATAAAGACTTCGTGGACATATTACTCTCAGTGATGCACCAATCTATGTTTCCTCAGAGTGAACAAAATCATATCATTGACCGAACTAACATGAAGGCTATTTTACTGGACTTGATTGTTGGAGCAATTGATACATCTGCTACCGCTATTGAGTGGGCTTTATCAGAGCTTTTGAGGCATCCAAGGGTGATGAAAATCCTTCAAGATGAGATAGAGAATGAAGTAGGAATGAGGAGAATGGTGGAAGAGAAAGATTTGATGAAGTTGAGTTACTTGGATATGGTGGTGGATGAGACCTTAAGACTGTATCCTGTTGGACCTTTACTGCTCCCTCGAGAATCCAGAGAGAGCATCACAATTGATGGTTATTATATAAAGAAAAAGTCACGAGTGATAATAAATGCATGGGCAATAGGGCGGGATCCTAATGTATGGTCGGATGCTGAAACATTTTATCCAGAGCGATTTGTCAACAAGAGAATGAATTATCCAGGGCAAGACTTTCAGTCTATACCATTTGGTTCTGGTCGAAGGGCTTGCCCTGGGATTCAACTGGGTTTGATTACCGTTAGACTGGTTATAGCTCAATTGGTGCATTGCTTTAATTGGGAACTTCCATCTAATGTTAGTCCTGCCAACTTGAATATGCAAGAGAAATTTGGACTCTCAATGCCAAGAGCTCAACAGCTGCACGCAATACCAACTTATCGATTAGCTAGTGATGCTAAGCAAGCATAG 1536 0.4277 MSSAAAIVVHAFLLFTFVYLVYTVFLHPKHRNDDRKNPPGPPALPIIGNLHMLGTLPHRSLQSLSKKYGPIMSLQLGQVPTIVVSSSEAAVLFLKTHDIVFASRPKFQGSEIMSYGSKGMAFSEYGPYWRSVRKLCTLQLLSTSKVESFAPIRREELSLVVKSLENAAAVGQLVNLTEVVENLIEDTVYKMILGRNKYKQFDLKRLVQEALALTGAFNLADYVPWLGPFDLQGLTRSWKKISKTLDEVLEKIITEHEQAANVDNRHHKDFVDILLSVMHQSMFPQSEQNHIIDRTNMKAILLDLIVGAIDTSATAIEWALSELLRHPRVMKILQDEIENEVGMRRMVEEKDLMKLSYLDMVVDETLRLYPVGPLLLPRESRESITIDGYYIKKKSRVIINAWAIGRDPNVWSDAETFYPERFVNKRMNYPGQDFQSIPFGSGRRACPGIQLGLITVRLVIAQLVHCFNWELPSNVSPANLNMQEKFGLSMPRAQQLHAIPTYRLASDAKQA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00234 511 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 Gene3D Cytochrome P450 28 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 FunFam Cytochrome P450 83B1 25 499 - -
Rops2g00234 511 CDD CYP71-like 67 496 - -
Rops2g00234 511 PANTHER CYTOCHROME P450 93A3-LIKE 15 505 - -
Rops2g00234 511 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Rops2g00234 511 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00234 511 Pfam Cytochrome P450 38 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00234 Rops-Chr2 3579244 3581153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00234 14 503 Cytochrome P450 AT3G26310 39.315 2.92e-127 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00234 - - psat:127113357 764.992