Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00233 ATGTCTTCTGCAGCGGTATTAGTACATGCTTTCCTTATTTTCACTTTCTTATTCCTTGTATACACGGTGTTCTTCCATCCAAAACAAAGACACGCTGATCGGAAAAGGCCACCAGGTCCACCAGCTTTGCCAATTATTGGGAACCTCCACATGTTGGGTACCCTTCCACACCGCACACTTCACTCCCTGTCCAAAAAATATGGCCCCATCATGTCTTTGCAACTGGGTCAAGTCCCAACTATTGTGGTTTCCTCCTCAGAGGCTGCTGAGTTATTCCTCAAGACCCACGACACCGTTTTCGCAAGCCGGCCAAAGAGTAAAGGAACTGAGCTCATGTACTACGGCTCCAAAGGCTTGGCGTTTTCTGAGTATGGTCCATACTGGCGCGGCGTGAAGAAACTGTGCACTTTGCAACTTCTCAGCCCATCAAAAGTTGAGCTCTTTGCTCCTATTAGGAGGGAGGAGCTAAGTCTCGTTGTGAAGTCACTGGAAAAAGCCGCAGGGATGGGTCAGCTTGTGAACCTTAGCGAGATTGTAGAGAACCTCATAGAGGATATAATGTATAAGATGATACTGGGTCACAATAAGTATCACCAATTTGACTTGAAGAGGCTAGTCCGTGAAGCATTAAAACTGCTCGGAGCTTTTAATCTGGCAGATTTTGTGCCCTGGCTAGGCGCATTAGATCCTCAGGGAGTACCAGGGGGCTTCAAGAAAATCGGTAAAGCACTTGATGAGTTGCTGGAAAAGATAATAGCCGAGCATGAACAAGCTGGTGACGAAGACAAAAGGCATCGTAAAGACTTCATAGACATACTGCTCTCAATCATGCATCAATCTGTGGATCCTGAGAGTGAGCAAAACCATAACATTGATCGAACTAACATGAAGGCTATTTTACTAGATATGATTTTTGCGGGAATTGAAACATCTGCTCTTGCAATTGAGTGGGCTTTATCAGAGCTTTTGAGGCATCCAAGGGTGATGAAAATCCTTCAAGATGAGATACAGAATGAAGTAGGAATGAGGAGAATGGTGGAAGAGAAACATTTGATTAAGTTGAGTAACTTGGATATGGTGGTAGATGAGACCTTAAGATTGTATCCTGTTGGACCCTTACTGATCCCTAGAGAATCCAGAGAGAGCATTACAATTGATGGTTATTATATAAAGAAAAAGTCACGAGTGATAATAAATGCATGGGCAATAGGGCGGGATCCTAAAGTGTGGTCAGATAATGCTGAAACATTTTATCCAGAGAGATTTATCAACAAGAAAATAAATTATCAAGGACAAGACTTTCAATCTATACCATTTGGTTCTGGTCGAAGAGCTTGTCCTGGGATTCGATTGGGTTTGATTACCACTAAACTAGTTATAGCTCAATTGGTGCATTGCTTTGATTGGGAACTTTCATCCAATGTTGGTCCTGCCAACTTGAATATGCAGGAGAAATTTGGACTCTCAATGCCAAGAGCCCAGCAGTTGCAGGCAATACCAACTTATCGTTTAGCTGGTGATGCTATGCAAATATAG 1536 0.431 MSSAAVLVHAFLIFTFLFLVYTVFFHPKQRHADRKRPPGPPALPIIGNLHMLGTLPHRTLHSLSKKYGPIMSLQLGQVPTIVVSSSEAAELFLKTHDTVFASRPKSKGTELMYYGSKGLAFSEYGPYWRGVKKLCTLQLLSPSKVELFAPIRREELSLVVKSLEKAAGMGQLVNLSEIVENLIEDIMYKMILGHNKYHQFDLKRLVREALKLLGAFNLADFVPWLGALDPQGVPGGFKKIGKALDELLEKIIAEHEQAGDEDKRHRKDFIDILLSIMHQSVDPESEQNHNIDRTNMKAILLDMIFAGIETSALAIEWALSELLRHPRVMKILQDEIQNEVGMRRMVEEKHLIKLSNLDMVVDETLRLYPVGPLLIPRESRESITIDGYYIKKKSRVIINAWAIGRDPKVWSDNAETFYPERFINKKINYQGQDFQSIPFGSGRRACPGIRLGLITTKLVIAQLVHCFDWELSSNVGPANLNMQEKFGLSMPRAQQLQAIPTYRLAGDAMQI* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00233 511 Pfam Cytochrome P450 37 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 SUPERFAMILY Cytochrome P450 37 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 FunFam Cytochrome P450 83B1 24 499 - -
Rops2g00233 511 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 PANTHER CYTOCHROME P450 93A3-LIKE 14 504 - -
Rops2g00233 511 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00233 511 CDD CYP71-like 66 496 - -
Rops2g00233 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00233 Rops-Chr2 3558354 3560688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00233 5 505 Cytochrome P450 AT5G07990 40.784 1.33e-127 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00233 - - psat:127113357 743.421