Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00227 ATGCCAAATGGTAGCCTTGAGAGGCATCTATATCCAAGCCATGAGTTAAGCCAGAGGTTGGATGTGGTTCAGTTAGTGAGAATATGCAGTGATGTGGCTGAGGGAATGTCCTATCTGCACCATTACTCTCCTGTGAAAGTAGTGCATTGTGATCTTAAGCCGAGCAATATACTCCTTGATGATGATCTGACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTCTAAAAGGTGATGAGAGTCTGTTCTCCAAGAATCAAAGATCTTTCAGTTCAACACAAGGCTTGCTGTGTGGCTCCGTTGGCTATATAGCTCCCGAATATGGAATGGGAAAACATGCTTCAACTGAGGGTGATGTTTACAGTTTTGGTGTAATTCTGTTAGAAATGGTGACAGGAAGACGCCCCACAGATGTCCTCACCCATGAAGACATTCTTCCAAGAATGCCACCTTCTGCCTCATTATACACTACTCAAGGTGTTCAAGCCCCAGCTAATTTTCCATTTTCCGATTCTGTTTACACTATGCAGGACCATGCCATCCTGAGAGCCTTATATGAAAACAATGGATCAAACTTGACCAATGGTTTCAAGACAGAGAGGGAGATGGTCAGTGTCTCACAGGAATGA 630 0.4365 MPNGSLERHLYPSHELSQRLDVVQLVRICSDVAEGMSYLHHYSPVKVVHCDLKPSNILLDDDLTALVTDFGIARLLKGDESLFSKNQRSFSSTQGLLCGSVGYIAPEYGMGKHASTEGDVYSFGVILLEMVTGRRPTDVLTHEDILPRMPPSASLYTTQGVQAPANFPFSDSVYTMQDHAILRALYENNGSNLTNGFKTEREMVSVSQE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00227 209 Pfam Protein kinase domain 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00227 209 FunFam Os07g0541700 protein 1 92 - -
Rops2g00227 209 Gene3D Transferase(Phosphotransferase) domain 1 1 192 - -
Rops2g00227 209 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 143 - -
Rops2g00227 209 SMART serkin_6 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00227 209 SUPERFAMILY Protein kinase-like (PK-like) 1 148 IPR011009 -
Rops2g00227 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Rops2g00227 209 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00227 Rops-Chr2 3486683 3487692 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00227 1 140 Receptor kinase-like Gene Family AT3G47090 53.741 8.13e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops2g00227 Pkinase 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00227 - - lja:Lj4g3v2002960.1 263.077