Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00223 ATGGCTTCTGCAGCAGCTATGGCATTACAGGCTTTTCTTCTTTTCATCTTCACATACCTTGTGTACACAGTGTTCTTGCGTGCAAAGCAAAGAAAGGTCGATCGGAAAAAGCCACCAGGTCCGTTAGCGTTGCCAATTATTGGGAACCTCCACATGTTGGGTACCCTTCCACATCGCACACTTCTGTCTCTTTCCAAAAAATATGGCCCCATCATGTCCTTGCAACTTGGACAAATCCCGACTATTGTGGTTTCTTCCTCTGAGGCTGCTCAGTTATTTCTGAAGACCCACGACATCGTTTTCGCAAGCCGGCCAATGATTCAAGTATCTGAGCTCATGTCCTACGGCTCCAAGGGCATGGCGTTTTCTGAGTACGGTCCATACTGGCGCAGTGGGCATTTCCGTCCGACGTTTTGTACGGAGGGGCAGTTAGGTAAAAAACCCTCACAACTTCTCAGCACTTCAAAAGTTGAGCTCTTTGCTCCTATTAGGAGGGAGGAGCTAGGTCTCGTGGTGAAGTCACTGGAGAAAGCCGCAGCGGTGGGTCAGCTTGTGAACCTTAGCGAGGTTGTAAAGAACCTTATAGAGGATATAATGTATAAAATTATACTAGGTCCGAATAAGTATCCCCAATTTGACTTGAAGAGGCTAGTACAAGAAGCAACGGCATTGGTCGGAGCTTTTAATCTGGCAGATTATGTGCCTTGGCTAAGTGCATTTGATTTTCAGGGAATAATGCGGGGCTGCAAGAAAATCAATAAAGCATTTGATGAGGTGTTGGAGAAGATAATAACAGAGCATGAACTAGCTGGTAATCTAGACAAAGGGCATCATAAAGACTTCGTAGACATACTGCTCTCAATGATGCACCAATCTATGGATCCTCAGAGTGAACAAAACCATATCATTGGTAGAACTAACATCAAGGCTATTTTAATAGATCTGATTGTGGGGGCAATGGAAACATCTGCTACTGTGATTGAGTGGGTTTTGTCAGAGCTTTTAAGGCATCCAAGGGCGATGAAAGTCCTTAAAGATGAGATAGAGAATGAAGTCGGAATGAGAAGAATGGTGGAAGAGAAAGATCTGATGAAGTTGAGTTACTTGGATATGGTGGTGGATGAGACCTTAAGACTGCATCCTGTTGCACCCTTATTGGTCCCTCGTGAATGCAGAGAGAGCATCACAATTGATGGTTATGATATTAAGAAAAAGTCAAGAGTCATAATAAATGCATGGGCAATAGGAAGGGATCCTAATGTGTGGTCGGATAATGCTGAAACATTTTATCCAGAGAGGTTTATCATCAAGAAAATAAATTATCAAGGACAAGATTTTCAATCTATACCATTTGGATCTGGTCGTAGAGCTTGCCCTGGGATTCAACTGGGTTTGGTTACCGTTAGACTGGTTATAGCTCAATTGGTGCATTGCTTTAATTGGGAACTTCCATCTAATGTTAGTCCTGCCAACTTGAATATGCAAGAGAAATTTGGACTCTCAATGCCAAGAGCTCAACAGCTGCACGCAATACCAACTTATCGATTAGCTAGTGATGCTAAGCAAGCATATATATGTTCATCATCTTACTATGACCATCTCTCTTAG 1608 0.4297 MASAAAMALQAFLLFIFTYLVYTVFLRAKQRKVDRKKPPGPLALPIIGNLHMLGTLPHRTLLSLSKKYGPIMSLQLGQIPTIVVSSSEAAQLFLKTHDIVFASRPMIQVSELMSYGSKGMAFSEYGPYWRSGHFRPTFCTEGQLGKKPSQLLSTSKVELFAPIRREELGLVVKSLEKAAAVGQLVNLSEVVKNLIEDIMYKIILGPNKYPQFDLKRLVQEATALVGAFNLADYVPWLSAFDFQGIMRGCKKINKAFDEVLEKIITEHELAGNLDKGHHKDFVDILLSMMHQSMDPQSEQNHIIGRTNIKAILIDLIVGAMETSATVIEWVLSELLRHPRAMKVLKDEIENEVGMRRMVEEKDLMKLSYLDMVVDETLRLHPVAPLLVPRECRESITIDGYDIKKKSRVIINAWAIGRDPNVWSDNAETFYPERFIIKKINYQGQDFQSIPFGSGRRACPGIQLGLVTVRLVIAQLVHCFNWELPSNVSPANLNMQEKFGLSMPRAQQLHAIPTYRLASDAKQAYICSSSYYDHLS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00223 535 PANTHER CYTOCHROME P450 93A3-LIKE 15 517 - -
Rops2g00223 535 Gene3D Cytochrome P450 23 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 FunFam Cytochrome P450 83B1 24 511 - -
Rops2g00223 535 CDD CYP71-like 67 508 - -
Rops2g00223 535 SUPERFAMILY Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 Pfam Cytochrome P450 38 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Rops2g00223 535 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00223 535 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00223 Rops-Chr2 3380972 3385909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00223 13 519 Cytochrome P450 AT5G07990 38.031 1.03e-115 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00223 - - psat:127113357 710.679