Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00222 ATGTTTTTTTCAATCCCCCTGTTGCTCCTTTTAACATTCACATTTGTTCTCTCCGCCACCTTGTTGCTTCGTAAACAAGGCAAAGATGACCGGAGACACCCACCAGGTCCACCGGGCTTACCGATCATCGGTAACCTCCACATGTTGGGGAAGCTCCCACACCGCACCCTCGAATCCATGGCCAAACGATATGGCCCCATCATGTATCTACGGCTAGGACAGGTCCCAACCATTGTGGTCTCTTCCTCTGAAGCTGCCGAGCAATTATTCAAGTCCCACGACGTCGTTTTCGCTAGCCGTCCCAGACTCGAAGCTTCCAAGTACCTCACTTATGGCTCTAAAGGGATAGTCTTCTCGGAATACGGTGCGTATTGGCGTAACATGAGGAAGGTGTGCACCTTGCAACTTCTTAGTGCCTCCAAAGTTGAGTCCTTTGCACCTTTGAGGAAGAGAGAGCTGCAACTAACGGTGAAGTCGCTAGAGAAAGCCGCAATAGAGGGTGAGGTGGTTGACCTTAGCGAGATGGTCCACAACCTTGTAGAGGGTATGGTGTACAAAATGGTGTTGGGATGTAGTAATGATGAAAAGTTTGATTTGAAGGGGCTAATCAAACAGGGGATGAGCCTTGGTGGAGCCTTTAATCTAGCAGATTATGTGCCTTGCCTTGGAGCTTTGGATCTTCAGGGTTTGAAACGAAGCTTCAAGAAAACTAGTAAAGGGATTGACCAAGTATTGGAGAAGATAATCAAGGAGCATGAACAGGGTTCAGATGTACAAAATAGCTGGCACCATAACGATTTCATAGACATTTTACTCTCACTGATGCACCATCCCATCGATTCCTACGATGAACAAAACCATGTCATTGATCGAAATAACATTAAGGCTGTAGCGCTAGATATAATTGCTGGGGCATTTGAAACTTCTTCAACTGTTGTGGAGTGGGCTTTATCCGAGCTCTTAAGGCACCCAAGAGTGATGAAAAACCTTCAAGATGAGCTAGATAATGTGGTTGGAGTGAACAGATTGGTGGAGGAGAATGATTTAGCAAAGTTGAGTTACTTAGATATGGTGATCAAGGAGACCTTAAGATTATATCCTCCTGGACCATTAGTTCCCCGAGAGTCAAGAGAGGATGCTATGGTTCATGGTTATTTCATAGAGAAAAAGTCAAGAATCATCATAAATTTATGGGCAATAGGAAGAGATCCTAATATATGGTCTGATAATGCTGAAGTATTTTATCCAGAGAGATTCATCAATAACAATTTTGACTTTAGAGGATATGACTTTCAGTTTATACCATTTGGTTTTGGTCGCAGAGGATGTCCTGGAATACAGTTAGGCCTAGCTACGGTTAAACTTATTGTCGCTCAATTAGCACATTGCTTTTGTTGGGAGCTTCCACGGGGCATGATCCCAGATAACTTGGACATGAACGAGAAATTTGGCCTCTCAATACCAAGAGCCAAGCACTTACTTGCCGTGCCAACATATCGTCTTCTCAAAGAAGCACATAACCATTGA 1527 0.4414 MFFSIPLLLLLTFTFVLSATLLLRKQGKDDRRHPPGPPGLPIIGNLHMLGKLPHRTLESMAKRYGPIMYLRLGQVPTIVVSSSEAAEQLFKSHDVVFASRPRLEASKYLTYGSKGIVFSEYGAYWRNMRKVCTLQLLSASKVESFAPLRKRELQLTVKSLEKAAIEGEVVDLSEMVHNLVEGMVYKMVLGCSNDEKFDLKGLIKQGMSLGGAFNLADYVPCLGALDLQGLKRSFKKTSKGIDQVLEKIIKEHEQGSDVQNSWHHNDFIDILLSLMHHPIDSYDEQNHVIDRNNIKAVALDIIAGAFETSSTVVEWALSELLRHPRVMKNLQDELDNVVGVNRLVEENDLAKLSYLDMVIKETLRLYPPGPLVPRESREDAMVHGYFIEKKSRIIINLWAIGRDPNIWSDNAEVFYPERFINNNFDFRGYDFQFIPFGFGRRGCPGIQLGLATVKLIVAQLAHCFCWELPRGMIPDNLDMNEKFGLSIPRAKHLLAVPTYRLLKEAHNH* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00222 508 Gene3D Cytochrome P450 20 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 FunFam Cytochrome P450 83B1 21 496 - -
Rops2g00222 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Rops2g00222 508 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 CDD CYP71-like 63 493 - -
Rops2g00222 508 PANTHER CYTOCHROME P450 93A3-LIKE 10 501 - -
Rops2g00222 508 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00222 508 Coils Coil 327 347 - -
Rops2g00222 508 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00222 Rops-Chr2 3362896 3364899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00222 41 502 Monolignol Biosynthesis Gene Families AT4G36220 42.405 8.37e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00222 - - gmx:100814172 724.931