Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00220 ATGTCTTCTGCAGCAGCAATAGTAGTACATGCTTTCCTTCTTCTCACTTTCGTATACCTTGTTTATACCGTCTTCTTCCATCCAAAACATAGAAACGATGATCGGAAAAATCCACCAGGTCCGCCAGCACTGCCAATTATTGGGAACCTCCACATGTTGGGTACCCTTCCACATCGCTCACTTCAGTCTCTATCCAAAAAATATGGTCCCATCATGTCCTTGCAATTGGGTCAAGTCCCAACTATTGTGGTTTCATCCTCTGAGGCTGCTGAGTTATTCCTCAAGACCCACGACATCGTTTTCGCAAGCCGGCCAAAGATTCAAGGATCTGAGCTCATGTCCTACGGCTCCAAGGGCATGGCGTTTTCTGAGTATGGTTCATACTGGCGCAGTGTGAGGAAATTATGCACTTTGCAACTTCTCAGCACATCAAAAGTTGAGTCCTTTGCTCCTATTAGGAGGGAGGAGCTAAGTCTCGTGGTGAAGTCACTTGAGAATGCCGCAGGGGTGGGTCAGGTGGTGAACCTTAGCGAGGTTGTAGAGAACCTTATAGAAGATATAGTGTATAAAATGATACTGGGTCGCAATAAGTATAAGCAATTTGACTTGCACAGGCTAGTACAAGAAGCAATGGCATTGATTGGAGCTTTTAATCTGGCAGATTATGTGCCTTGGCTAGGCCCATTTGATCTTCAGGGAATAACACGGAGCTGCAAGAAAATAAGTAAAGCACTTGATGAGGTGCTGGAAAAGATAATAACAGAGCATGAACAAGCTGCTAATGTAGACAATAGGCATCATAAAGACTTCGTGGACATATTACTCTCAATGAAGCACCAGTCTATGGATCCTCAGAGTGAACAAAGCCATATTGACCGGACAAACATGAAGGCTATTTTACTGGACATGATTGTTGCAGCAATTGATACATCTGCTACCGCTATTGAATGGGCTTTATCAGAGCTTTTGAGGCATCCAAGGGTGATGAAAATCCTTCAAGATGAGATACAGAATGAAATAGGAATGAGGAGAATTGTGGAAGAGAAAGATTTGATGAAGTTGAGTTACTTGGATATGGTGGTGGATGAGACCTTAAGACTGTATCCTGTTGGACCTTTACTGGTCCCTCGAGAATCCAGAGAGAGCATTATAATTGATGGTTATTATATAAAGAAAAAGTCACGAGTGATAATAAATGCATGGGCAATAGGGCGGGATCCTAATGTATGGTCGGATGCTGAAACATTTTATCCAGAGCGATTTGTCAACAAGAGAATGAATTATCCAGGGCAAGACTTTCAGTCTATACCATTTGGTTCTGGTCGAAGGGCTTGCCCTGGGATTCAACTGGGTTTGATTACCGTTAGACTGGTTATAGCTCAATTGGTGCATTGCTTTAATTGGGAACTTCCATCTAATGTTAGTCCTGCCAACTTGAATATGCAAGAGAAATTTGGACTCTCAATGCCAAGAGCTCAACAGCTGCACGCAATACCAACTTATCGATTAGCTAGTGATGCTAAGCAAGCATAG 1533 0.4292 MSSAAAIVVHAFLLLTFVYLVYTVFFHPKHRNDDRKNPPGPPALPIIGNLHMLGTLPHRSLQSLSKKYGPIMSLQLGQVPTIVVSSSEAAELFLKTHDIVFASRPKIQGSELMSYGSKGMAFSEYGSYWRSVRKLCTLQLLSTSKVESFAPIRREELSLVVKSLENAAGVGQVVNLSEVVENLIEDIVYKMILGRNKYKQFDLHRLVQEAMALIGAFNLADYVPWLGPFDLQGITRSCKKISKALDEVLEKIITEHEQAANVDNRHHKDFVDILLSMKHQSMDPQSEQSHIDRTNMKAILLDMIVAAIDTSATAIEWALSELLRHPRVMKILQDEIQNEIGMRRIVEEKDLMKLSYLDMVVDETLRLYPVGPLLVPRESRESIIIDGYYIKKKSRVIINAWAIGRDPNVWSDAETFYPERFVNKRMNYPGQDFQSIPFGSGRRACPGIQLGLITVRLVIAQLVHCFNWELPSNVSPANLNMQEKFGLSMPRAQQLHAIPTYRLASDAKQA* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00220 510 CDD CYP71-like 67 495 - -
Rops2g00220 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Rops2g00220 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 Gene3D Cytochrome P450 28 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 PANTHER CYTOCHROME P450 93A3-LIKE 15 504 - -
Rops2g00220 510 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g00220 510 FunFam Cytochrome P450 83B1 25 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00220 Rops-Chr2 3323203 3325018 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00220 6 506 Cytochrome P450 AT5G07990 39.608 2.37e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00220 - - psat:127113357 759.985