Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00219 ATGTCCTATCTGCACCATTACTCTCCTGTGAAAGTAGTGCATTGTGATCTTAAGCCGAGCAATATACTCCTTGATGATGATCTGACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTCTAAAAGGTGATGAGAGTCTGTTCTCCAGTAACTCAGCATCTTTCAGTTCAACACAAGGCTTGCTGTGTGGCTCCGTTGGCTATATAGCTCCCGAATATGGAATGGGAAAACATGCTTCAACTGAGGGTGATGTTTACAGTTTTGGTGTAATTCTGTTAGAAATGGTGACAGGAAGACGCCCCACAGATGTCCTCACCCATGAAGACATTCTTCCAAGAATGCCACCTTCTGCCTCATTATACACTACTCAAGGTGTTCAAGCCCCAGCTAATTTTCCATTTTCCGATTCTGTTTACACTATGCAGGACCATGCCATCCTGAGAGCCTTATATGAAAACAATGGATCAAACTTGACCAATGGTTTCAAGACAGAGAGGGAGATGGTCAGTGTCTCACAGGAAACAGATCTGACAACTGATATGAATGTTGAAAACTCTTCAGTGGTATCAAATTTTGATATGGGTAGGGTGCCCTTTGAGAATCAGCATCATCCACCTGCTTCTGTTGCAGCAGGGGACCTTCATGGTTTGTGGATTACTAAATTCAAACAAAGGACCATTTAG 684 0.4284 MSYLHHYSPVKVVHCDLKPSNILLDDDLTALVTDFGIARLLKGDESLFSSNSASFSSTQGLLCGSVGYIAPEYGMGKHASTEGDVYSFGVILLEMVTGRRPTDVLTHEDILPRMPPSASLYTTQGVQAPANFPFSDSVYTMQDHAILRALYENNGSNLTNGFKTEREMVSVSQETDLTTDMNVENSSVVSNFDMGRVPFENQHHPPASVAAGDLHGLWITKFKQRTI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00219 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 12 24 IPR008271 GO:0004672|GO:0006468
Rops2g00219 227 ProSiteProfiles Protein kinase domain profile. 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00219 227 SMART serkin_6 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00219 227 SUPERFAMILY Protein kinase-like (PK-like) 1 113 IPR011009 -
Rops2g00219 227 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 109 - -
Rops2g00219 227 Gene3D Transferase(Phosphotransferase) domain 1 1 150 - -
Rops2g00219 227 Pfam Protein kinase domain 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00219 Rops-Chr2 3307013 3308076 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00219 1 147 Receptor kinase-like Gene Family AT3G47580 45.270 2.21e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops2g00219 Pkinase 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00219 - - lja:Lj4g3v2002960.1 196.823