Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00215 ATGAATTCCCCACCTGATAACCAGAGCACAGTACCTAGAGAATTGAACAGCTCAAATGCCATTTTCAATGGAATTGATGGAAATGGGAATTTAGAATCCATTAATGGTGAGGTGGAAGCCAATCATCGATTGCTTTTGGTTCAGTGGTTAACTAGTCTTCTTCCTTCATTAAACTTTTCAATAAATGTCACGGATGGTGAGTTAAGAGCGTGCTTGAGCAATGGTACAATTTTGTGCCAGATACTCAACAAGCTAAGACCTGGTTCAGTGACCGTGGTTAGTGAATCTGATCATTCTCTGCCATCACAATCAGAAAATGTTAAATCGTTTCTGAGAGCTTTGGATGGAATGGGATTGCCCCGGTTTGAAATATCAGACCTAGAGAAGGGATCTATGAAGGCTGTTGTGGATTGTCTGTTAACACTTAGAGCAAAAAGTTTGCAGAATGCTTTGGGAGATAATTCCAACTTTACGAGCCCTTGTGTTAGTAGCCCAGAGCCATCAGCTTCATTAAGACACCACGTTGGTCATAAGTTCCATGAGGTGTTTCAACTTAAACCTGAAAGCTACGCAGATCTTCCTGCTGCAAAAATAGCAGAAATTATAAAGTCAAACAGTTTAGATTGTCTGTTGATGCAGAATGCTCCCACTCAATCGCTTCTAAATGTTGTGAATGGTATTCTTGAAGAAAGCATAGAAAGAAGAAATGGTGAAATACCTCATCGTGTGGCATGCTTGTTGAGAAAGATTTCCCAGGAGATTGAGCGGCGCATCTCAACTCAAGCAGAACATATAAGAACTCAAAACAATCTTTTCAAGGCTCGGGAAGAAAAATATCAATCGAGAATAAGAATACTTGAGGCACTTGCATCTGGAACTAGAGAAGAGAGTGAGAGGGAACTTTGGTGGCAGATATTTGCTAGCCCTCCTCAGCAGTGGAAGGCTGAGAAGATCAAAGAGGAAGAAAAGGAGGAAGATGAAAATGAGGTTATTAGGTTGATGAAAGAGCTGGAGGACAAAAATTATGAAATTTCAGCATTAAAGGAAGAACTGGAAACAACCAAAAACACATGTAAAGTACATTGCTCACAGATGGGAGAAGAAACTAAGGGTGCTAAAGCAGAATTGAGACAGAAGTCTCAAGATTATGAGCATCAAATAGAAGAATTAAGAAATAAGGTTAAGAAGCTTGAGGCTTCTTCTGAATCAAAACATCAGAAGTGGAACCTGAAAAAGAACCAATTGCAGGCTGCTATAAATTTTTACTTTAGTTCCTTACAGAAATTGAAATTATCTTGGGAATCCATTAAGCAAGATATTGTGAAAGAGCAAACGGTTTATGCAGAGGAGTGTAATCAATTAGGTGTAAATCTTAAACCACTTGTACAAGCAGCTGAGAACTATCAAGTTGTTCTTGCTGAAAATCGAAAACTGTTTAATGAAATTCAAGAATTTAAAGGAAATATCAGAGTATATTGTCGAATTAGACCCTTTCTTTCAGGAAAAAAGGAAAAACAGTCTACTGTAGAACACGTTGGAGAAAATGATTTGGTTGTGGCAAATCCCTCCAAAGACGGGAAAGATGCTCTTCGATCATTCAAGTTTAATAAGGTTTTCGGCCCTGCCTCAACTCAAGTGGAGATATATTCTGACATTCAATCCTATGTAAGATCAGTACTCGATGGGTATAATGTATGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACTTACACAATGACTGGTCCAAGTGGAGCAACAAGTGAGAATCTTGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAGTCTTACAACAAGTAGAGCAAGGATCATGGACTATGAGATTGGAGTTCAAATGTTTATTCTTTGCATGGTCTTTCTTCATTCCTCTTGTATTTTCTTGTATGGTTTCCTTGATTTGCACACACTTGGGATATTGACTCACTCTCAGTCCAAGGGTTTAGCTGTACCTGATGCTAGCTTGTTCCCTGTCAAATCACCTTCAGATGTCATTAAGCTAATGGAGATTGGACTTAATAATAGAGCCATTGGTGCAACTTCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTATCAATTCATGTTCAAGGGAAGGATTTGACGTCTGGTTCTACTCTGCATGGTAATCTTCATTTGGTAGATTTGGCAGGTAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGGGATAGGCTTAGGGAAGCACAGCATATAAACAAGTCACTATCTGCCCTTGGAGATGTCATTTTTTCCCTTTCTCAAAAGAGCTCCCATATACCATACAGAAACAGCAAGCTTACTCAACTTCTGCAAACCTCTCTTGGTGGTCATGCAAAGACACTCATGTTTGTCCAAATTAACTCAGATGTAAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGCTTCTGGAGTTGAATTAGGAGCTGCACGAAGCAACAAAGAGGGAAGAGATGTCAAAGAATTAATGGAACGGACCTCGCAGGTAGGTTCCATGAAGAACGCTATGTCGAAAAAAGATAAGGAGATTGAGAGACTTCAATTACAGAATGCTACAGTTGGTGGTTTTCATAAGCAAAACCAAAAACCACCAAGTGGAAATTATAAGCACCTTGAAGCTGAAACACAGCAACCAATGGATGATCATATGTACCAAAATGAATCTCTCCATCAATCTGAAATTGGTGGGCGAGATAAGGGAAAGAATACTGAAACTTCGAGATTTGCAGATGCCTGTATTCATGTAACATTAAGTGATATTTCTGACAATGGTCTTGCTCAGGGCGCAGAATCTGATGGTTCTTCTGAAAATTCCACTCTCACTGAAGGCACACAATCATCAGATAAGATAGAAAAACCTAAAGGATTACCCAAAAATGTCCCAGCCCCAAGGAAATTAGGCCGAACCCCATCTGCCGCGTCTATAGTAAAGGACTTCCTGAAGAAACCTACAGTTTCAGGTATTAAAAAAAGCGCCAGTATTGGCAACCTCAAACCTCCAAAACGGTGGCAGTGA 3054 0.3962 MNSPPDNQSTVPRELNSSNAIFNGIDGNGNLESINGEVEANHRLLLVQWLTSLLPSLNFSINVTDGELRACLSNGTILCQILNKLRPGSVTVVSESDHSLPSQSENVKSFLRALDGMGLPRFEISDLEKGSMKAVVDCLLTLRAKSLQNALGDNSNFTSPCVSSPEPSASLRHHVGHKFHEVFQLKPESYADLPAAKIAEIIKSNSLDCLLMQNAPTQSLLNVVNGILEESIERRNGEIPHRVACLLRKISQEIERRISTQAEHIRTQNNLFKAREEKYQSRIRILEALASGTREESERELWWQIFASPPQQWKAEKIKEEEKEEDENEVIRLMKELEDKNYEISALKEELETTKNTCKVHCSQMGEETKGAKAELRQKSQDYEHQIEELRNKVKKLEASSESKHQKWNLKKNQLQAAINFYFSSLQKLKLSWESIKQDIVKEQTVYAEECNQLGVNLKPLVQAAENYQVVLAENRKLFNEIQEFKGNIRVYCRIRPFLSGKKEKQSTVEHVGENDLVVANPSKDGKDALRSFKFNKVFGPASTQVEIYSDIQSYVRSVLDGYNVCIFAYGQTGSGKTYTMTGPSGATSENLGVNYRALNDLFSLTTSRARIMDYEIGVQMFILCMVFLHSSCIFLYGFLDLHTLGILTHSQSKGLAVPDASLFPVKSPSDVIKLMEIGLNNRAIGATSMNERSSRSHSVVSIHVQGKDLTSGSTLHGNLHLVDLAGSERVDRSEVTGDRLREAQHINKSLSALGDVIFSLSQKSSHIPYRNSKLTQLLQTSLGGHAKTLMFVQINSDVSSYSETLSTLKFAERASGVELGAARSNKEGRDVKELMERTSQVGSMKNAMSKKDKEIERLQLQNATVGGFHKQNQKPPSGNYKHLEAETQQPMDDHMYQNESLHQSEIGGRDKGKNTETSRFADACIHVTLSDISDNGLAQGAESDGSSENSTLTEGTQSSDKIEKPKGLPKNVPAPRKLGRTPSAASIVKDFLKKPTVSGIKKSASIGNLKPPKRWQ* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00215 1017 Gene3D Kinesin motor domain 429 820 IPR036961 -
Rops2g00215 1017 Gene3D - 326 365 - -
Rops2g00215 1017 SMART ch_5 42 145 IPR001715 GO:0005515
Rops2g00215 1017 SMART kinesin_4 486 826 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00215 1017 Coils Coil 316 357 - -
Rops2g00215 1017 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 430 820 - -
Rops2g00215 1017 ProSiteProfiles Calponin homology (CH) domain profile. 40 147 IPR001715 GO:0005515
Rops2g00215 1017 Pfam Calponin homology (CH) domain 45 143 IPR001715 GO:0005515
Rops2g00215 1017 PRINTS Kinesin heavy chain signature 768 789 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00215 1017 PRINTS Kinesin heavy chain signature 719 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00215 1017 PRINTS Kinesin heavy chain signature 562 583 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00215 1017 PRINTS Kinesin heavy chain signature 688 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00215 1017 ProSiteProfiles Kinesin motor domain profile. 488 818 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g00215 1017 MobiDBLite consensus disorder prediction 937 988 - -
Rops2g00215 1017 Coils Coil 373 407 - -
Rops2g00215 1017 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 37 149 - -
Rops2g00215 1017 MobiDBLite consensus disorder prediction 937 959 - -
Rops2g00215 1017 SUPERFAMILY Calponin-homology domain, CH-domain 37 143 IPR036872 -
Rops2g00215 1017 Gene3D - 34 148 IPR036872 -
Rops2g00215 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 856 IPR027417 -
Rops2g00215 1017 Coils Coil 842 862 - -
Rops2g00215 1017 PANTHER KINESIN-LIKE PROTEIN KLP-3 384 959 IPR027640 GO:0003777|GO:0007018
Rops2g00215 1017 Pfam Kinesin motor domain 494 816 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00215 Rops-Chr2 3211153 3217539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00215 373 818 Calmodulin-binding Proteins AT5G65930 36.062 5.22e-67 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00215 K10406 - mof:131148644 1042.34