Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00206 ATGGAGCTGATATATCAATTCAAAGGGATGAACTCACATGTTTTGGACAACTCAATTTTGGATATGCATAACTTGATGCCATTCTCTAGTGACAGCTTCTTGGGCTCTTCAGAACCTGGATTTCCAGGAAACTTGGAAGAAAATTTTCCAGGCCTTGTACATTATGTCAATCACAATACAGCTCCAGCTTCACTTCCTGTTTCTTCAGCAGAAAATGAAATCCATGAAGTTAAAAAGAGGAAAGCAACAGATATGTGTGGGCCCAGTTCTGCAAATTCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGATAAAAAATAGTTCTGGAAGAGGCAAGAGAGTAAAAAGGAATGAAACAGAAGATCAGAAACCAAAGGAAGTAGTTCATGTTAGAGCCAGAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAACTTAGGTGCTTGCAGAACATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAATAATGTTGGATGAGATCATAAACTATGTTCAGTCCTTGCATCATCAAGTGGAGTTCCTCTCTATGAAACTCACTGCAGCAAGTACCTTTTATGACTTCAATTCCGAGACAGATGCTTTAGAAACAATGCAGAGAGCAAAGGCATCCGAGGCACAAGAGTTGGCTAAGTATGTGAGAGAAGGATATGAAGGAGTTTCTTGCTTTGAATCAACTTGGCCTTCATCCCTATGA 750 0.404 MELIYQFKGMNSHVLDNSILDMHNLMPFSSDSFLGSSEPGFPGNLEENFPGLVHYVNHNTAPASLPVSSAENEIHEVKKRKATDMCGPSSANSTPAVSESGSKIKNSSGRGKRVKRNETEDQKPKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLHHQVEFLSMKLTAASTFYDFNSETDALETMQRAKASEAQELAKYVREGYEGVSCFESTWPSSL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00206 249 MobiDBLite consensus disorder prediction 79 142 - -
Rops2g00206 249 MobiDBLite consensus disorder prediction 111 142 - -
Rops2g00206 249 FunFam transcription factor BEE 3-like 133 204 - -
Rops2g00206 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 204 IPR036638 GO:0046983
Rops2g00206 249 MobiDBLite consensus disorder prediction 86 107 - -
Rops2g00206 249 CDD bHLH_AtBPE_like 126 211 - -
Rops2g00206 249 SMART finulus 142 192 IPR011598 GO:0046983
Rops2g00206 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 186 IPR011598 GO:0046983
Rops2g00206 249 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 67 214 IPR024097 GO:0006355
Rops2g00206 249 Gene3D - 136 199 IPR036638 GO:0046983
Rops2g00206 249 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00206 Rops-Chr2 3112583 3114303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00206 27 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 54.661 3.12e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Rops2g00206 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00206 - - gmx:100806942 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00206 2 3112583 3114303 Rops2g00206 2 3112583 3114303 ECH